RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CDCA7LQ96GN5 454 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 ZFYVE28Q9HCC9 887 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 SNCAIPQ9Y6H5 919 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 SPDYE5A6NIY4 337 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 GTF2A2P52657 109 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 SH3TC2Q8TF17 1288 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 FAM84BQ96KN1 310 aaPredicted RBP10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 PUS3Q9BZE2 481 aaKnown RBP10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 CSADQ9Y600 493 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 ALPK3Q96L96 1907 aa10.38□□□□□ -0.75
UPF3AP1-201ENST00000413731 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 GALR2O43603 387 aaPredicted RBP10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 HIBADHP31937 336 aaKnown RBP10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 CHAF1AQ13111 956 aaPredicted RBP10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 UBE4AQ14139 1066 aa10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 SHISA4Q96DD7 197 aa10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 RPAP1Q9BWH6 1393 aaPredicted RBP10.37□□□□□ -0.75
UPF3AP1-201ENST00000413731 DOCK3Q8IZD9 2030 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 H0YGN5 161 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 CLCN1P35523 988 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 TNNI2P48788 182 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 NBPF11Q86T75 865 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 KAZALD1Q96I82 304 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 SUCLG2Q96I99 432 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 MYH2Q9UKX2 1941 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 DOCK1Q14185 1865 aa10.36□□□□□ -0.75
UPF3AP1-201ENST00000413731 ZBED9Q6R2W3 1325 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 TLR2O60603 784 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 CETPP11597 493 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 CTGFP29279 349 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 ARHGEF6Q15052 776 aa10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 ZKSCAN4Q969J2 545 aaPredicted RBP10.35□□□□□ -0.75
UPF3AP1-201ENST00000413731 ADGRA2Q96PE1 1338 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 ALDH1L1O75891 902 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 PLCG2P16885 1265 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 ATN1P54259 1190 aaPredicted RBP10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 PPIL2Q13356 520 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 SNAPC2Q13487 334 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 MCM6Q14566 821 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 MTFR1Q15390 333 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 SLC4A10Q6U841 1118 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 FBXO33Q7Z6M2 555 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 VPS37DQ86XT2 251 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 ERO1BQ86YB8 467 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 TEKT1Q969V4 418 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 ZCCHC17Q9NP64 241 aaKnown RBP10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 SMC4Q9NTJ3 1288 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 RIPOR2Q9Y4F9 1068 aa10.34□□□□□ -0.75
UPF3AP1-201ENST00000413731 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 RAD21O60216 631 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 NBPF7P0C2Y1 421 aaPredicted RBP10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 INPP5BP32019 993 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 HDLBPQ00341 1268 aaKnown RBP10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 KIF22Q14807 665 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 LRRC24Q50LG9 513 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 METTL24Q5JXM2 366 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 ANKRD44Q8N8A2 993 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 VGLL2Q8N8G2 317 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 ZDHHC15Q96MV8 337 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 SRCIN1Q9C0H9 1055 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 BICC1Q9H694 974 aaKnown RBP10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 TMOD2Q9NZR1 351 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 CPA4Q9UI42 421 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 ATAD5Q96QE3 1844 aa10.33□□□□□ -0.76
UPF3AP1-201ENST00000413731 WDHD1O75717 1129 aaPredicted RBP10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 CT47B1P0C2W7 299 aaPredicted RBP10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 RABL6Q3YEC7 729 aaPredicted RBP10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 DCAF15Q66K64 600 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 APOBEC3HQ6NTF7 200 aaKnown RBP10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 C17orf99Q6UX52 265 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 FAM83AQ86UY5 434 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 TRMT2AQ8IZ69 625 aaKnown RBP10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 TBC1D22AQ8WUA7 517 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 SSH1Q8WYL5 1049 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 UTYO14607 1347 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 MAST3O60307 1309 aa10.32□□□□□ -0.76
UPF3AP1-201ENST00000413731 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 MAP3K7O43318 606 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 FRAT2O75474 233 aaPredicted RBP10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 GNRH1P01148 92 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 PSMC4P43686 418 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 BCAMP50895 628 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 PRMT2P55345 433 aa10.31□□□□□ -0.76
UPF3AP1-201ENST00000413731 SKIV2LQ15477 1246 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms