RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 MBD4O95243 580 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 FGFR2P21802 821 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 LIFRP42702 1097 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
TTC39A-208ENST00000413473 TACC3Q9Y6A5 838 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 FAM237AA0A1B0GTK4 181 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 SSRP1Q08945 709 aaKnown RBP17.27■□□□□ 0.36
TTC39A-208ENST00000413473 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
TTC39A-208ENST00000413473 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
TTC39A-208ENST00000413473 KIF2AO00139 706 aaPredicted RBP17.27■□□□□ 0.35
TTC39A-208ENST00000413473 FOXP4Q8IVH2 680 aaPredicted RBP17.27■□□□□ 0.35
TTC39A-208ENST00000413473 PPP1R13BQ96KQ4 1090 aa17.27■□□□□ 0.35
TTC39A-208ENST00000413473 MYH3P11055 1940 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 CUTAO60888 179 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 UBASH3AP57075 661 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 RASGRF1Q13972 1273 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 METTL16Q86W50 562 aaKnown RBP17.26■□□□□ 0.35
TTC39A-208ENST00000413473 DPF2Q92785 391 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 KCNH3Q9ULD8 1083 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
TTC39A-208ENST00000413473 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 MYL5Q02045 173 aa17.26■□□□□ 0.35
TTC39A-208ENST00000413473 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
TTC39A-208ENST00000413473 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
TTC39A-208ENST00000413473 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 PRKAB2O43741 272 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 SERPINC1P01008 464 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 GUCY1A2P33402 732 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 DMTNQ08495 405 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 RRP12Q5JTH9 1297 aaKnown RBP17.25■□□□□ 0.35
TTC39A-208ENST00000413473 SPECC1Q5M775 1068 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 NRDCO43847 1150 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 SLC5A1P13866 664 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 MFSD6Q6ZSS7 791 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 ERO1AQ96HE7 468 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 OGFRQ9NZT2 677 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
TTC39A-208ENST00000413473 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
TTC39A-208ENST00000413473 IFNAR1P17181 557 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
TTC39A-208ENST00000413473 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 CCDC82Q8N4S0 544 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 FOXN1O15353 648 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 SLU7O95391 586 aaKnown RBP17.24■□□□□ 0.35
TTC39A-208ENST00000413473 SYT10Q6XYQ8 523 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 STK11IPQ8N1F8 1099 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
TTC39A-208ENST00000413473 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 KCNJ14Q9UNX9 436 aa17.24■□□□□ 0.35
TTC39A-208ENST00000413473 STK36Q9NRP7 1315 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 KCNJ6P48051 423 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 CFAP100Q494V2 611 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 KRT23Q9C075 422 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 FANCLQ9NW38 375 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 TOB1P50616 345 aaPredicted RBP17.23■□□□□ 0.35
TTC39A-208ENST00000413473 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
TTC39A-208ENST00000413473 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 ITGB4P16144 1822 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 NUP98P52948 1817 aa17.23■□□□□ 0.35
TTC39A-208ENST00000413473 CBFA2T2O43439 604 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 MMP1P03956 469 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 BMP6P22004 513 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 TDO2P48775 406 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
TTC39A-208ENST00000413473 ELF2Q15723 593 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 UTP14CQ5TAP6 766 aaKnown RBP17.22■□□□□ 0.35
TTC39A-208ENST00000413473 WASF1Q92558 559 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
TTC39A-208ENST00000413473 BCL9O00512 1426 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
TTC39A-208ENST00000413473 GRIN1Q05586 938 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 CMTR1Q8N1G2 835 aaKnown RBP17.22■□□□□ 0.35
TTC39A-208ENST00000413473 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
TTC39A-208ENST00000413473 NPHP1O15259 732 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 BCAMP50895 628 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 PDE4BQ07343 736 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 RTN1Q16799 776 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 ZNF397Q8NF99 534 aaPredicted RBP17.21■□□□□ 0.35
TTC39A-208ENST00000413473 TMEM232C9JQI7 657 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
TTC39A-208ENST00000413473 WTAPQ15007 396 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
TTC39A-208ENST00000413473 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms