RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OSBPL5Q9H0X9 879 aaPredicted RBP7.77□□□□□ -1.17
USP54-202ENST00000413442 C1orf115Q9H7X2 142 aa7.77□□□□□ -1.17
USP54-202ENST00000413442 RNF186Q9NXI6 227 aa7.77□□□□□ -1.17
USP54-202ENST00000413442 ERC2O15083 957 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 ZFYP08048 801 aaPredicted RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 ZAP70P43403 619 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 RGS3P49796 1198 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 LBX1P52954 281 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 RHBDL3P58872 404 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 PPIL2Q13356 520 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 HDAC1Q13547 482 aaPredicted RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 DIXDC1Q155Q3 683 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 FASTKD5Q7L8L6 764 aaKnown RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 TTC6Q86TZ1 520 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 METTL16Q86W50 562 aaKnown RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 ZSCAN29Q8IWY8 852 aaPredicted RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 RWDD1Q9H446 243 aaPredicted RBP7.76□□□□□ -1.17
USP54-202ENST00000413442 ECHDC1Q9NTX5 307 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 FAM198AQ9UFP1 575 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 PCDHAC2Q9Y5I4 1007 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 TTC41PQ6P2S7 1318 aa7.76□□□□□ -1.17
USP54-202ENST00000413442 TRPA1O75762 1119 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 GNRH1P01148 92 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 HLA-DOAP06340 250 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 CYP7A1P22680 504 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 SNAPC2Q13487 334 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 UBE3CQ15386 1083 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 TBC1D9Q6ZT07 1266 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 IFNL1Q8IU54 200 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 TNS4Q8IZW8 715 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 OPTNQ96CV9 577 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 HAUS7Q99871 368 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 IL1RAPL2Q9NP60 686 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 SLC45A1Q9Y2W3 748 aa7.75□□□□□ -1.17
USP54-202ENST00000413442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.75□□□□□ -1.17
USP54-202ENST00000413442 DOCK2Q92608 1830 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 PHF20L1A8MW92 1017 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 IDH1O75874 414 aaKnown RBP7.74□□□□□ -1.17
USP54-202ENST00000413442 CAPN2P17655 700 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 TCP10Q12799 353 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 PRKG1Q13976 671 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 VGLL4Q14135 290 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 SLC9C2Q5TAH2 1124 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
USP54-202ENST00000413442 C20orf194Q5TEA3 1177 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 MOB2Q70IA6 237 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 TEX11Q8IYF3 940 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 DDRGK1Q96HY6 314 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 MS4A4AQ96JQ5 239 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 WRNIP1Q96S55 665 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 EHD4Q9H223 541 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 AS3MTQ9HBK9 375 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 ZFYVE28Q9HCC9 887 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 PICK1Q9NRD5 415 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 ATP8A2Q9NTI2 1148 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 PAG1Q9NWQ8 432 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 KCNH4Q9UQ05 1017 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 MAST2Q6P0Q8 1798 aa7.74□□□□□ -1.17
USP54-202ENST00000413442 FOCADQ5VW36 1801 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 RFX7Q2KHR2 1363 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 SSC5DA1L4H1 1573 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 MAGEB6P1A0A0J9YX57 407 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 C19orf81C9J6K1 198 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 GPR25O00155 361 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 FKTNO75072 461 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 GLRX3O76003 335 aaKnown RBP7.73□□□□□ -1.17
USP54-202ENST00000413442 ASNSP08243 561 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 GNAT2P19087 354 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 CACNB3P54284 484 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 PRMT2P55345 433 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 NFIAQ12857 509 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 PABPC4Q13310 644 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP54-202ENST00000413442 GIMAP6Q6P9H5 292 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 ANKRD23Q86SG2 305 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 AMOTL1Q8IY63 956 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 ZNF384Q8TF68 577 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 ERO1AQ96HE7 468 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 TRIM34Q9BYJ4 488 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 CRNKL1Q9BZJ0 848 aaKnown RBP7.73□□□□□ -1.17
USP54-202ENST00000413442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP54-202ENST00000413442 SNRKQ9NRH2 765 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 SCAF8Q9UPN6 1271 aaKnown RBP7.73□□□□□ -1.17
USP54-202ENST00000413442 SNCAIPQ9Y6H5 919 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 AOX1Q06278 1338 aa7.73□□□□□ -1.17
USP54-202ENST00000413442 MYO5AQ9Y4I1 1855 aaKnown RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 DDTLA6NHG4 134 aaPredicted RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 CAP2P40123 477 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 USP5P45974 858 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 KIF22Q14807 665 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 MIGA2Q7L4E1 593 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 CTU1Q7Z7A3 348 aaKnown RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 MAGEB6Q8N7X4 407 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 ZKSCAN4Q969J2 545 aaPredicted RBP7.72□□□□□ -1.17
USP54-202ENST00000413442 CLMNQ96JQ2 1002 aa7.72□□□□□ -1.17
USP54-202ENST00000413442 ZIC5Q96T25 663 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms