RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 EHMT1Q9H9B1 1298 aa7.02□□□□□ -1.29
HMGB3P31-201ENST00000413333 CORINQ9Y5Q5 1042 aa7.02□□□□□ -1.29
HMGB3P31-201ENST00000413333 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 SELPP16109 830 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 AMPD1P23109 780 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 LRFN4Q6PJG9 635 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 RUFY4Q6ZNE9 571 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 SLC16A10Q8TF71 515 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 WDR89Q96FK6 387 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 TNKS2Q9H2K2 1166 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 KRT82Q9NSB4 513 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 CSADQ9Y600 493 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
HMGB3P31-201ENST00000413333 PPM1GO15355 546 aaPredicted RBP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 DDX3YO15523 660 aaKnown RBP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 ZNF862O60290 1169 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 ATE1O95260 518 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 VSIG8P0DPA2 414 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 HNRNPUQ00839 825 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 KRT76Q01546 638 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 RASA3Q14644 834 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 SUZ12Q15022 739 aaKnown RBP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 HDXQ7Z353 690 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 KLHL23Q8NBE8 558 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 RBBP8NLQ8NC74 664 aaPredicted RBP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 BTBD6Q96KE9 485 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 NRSN2Q9GZP1 204 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 WDR3Q9UNX4 943 aaKnown RBP eCLIP7□□□□□ -1.29
HMGB3P31-201ENST00000413333 SNCAIPQ9Y6H5 919 aa7□□□□□ -1.29
HMGB3P31-201ENST00000413333 SBNO2Q9Y2G9 1366 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 PRAMEF27A3QJZ7 478 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 GFRA2O00451 464 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 TERTO14746 1132 aaKnown RBP6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 HTR3BO95264 441 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 PLCG1P19174 1290 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 TCEAL1Q15170 157 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 FXNQ16595 210 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 DDR2Q16832 855 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 C12orf40Q86WS4 652 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 GALNT11Q8NCW6 608 aa6.99□□□□□ -1.29
HMGB3P31-201ENST00000413333 DDAH1O94760 285 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 CLSTN1O94985 981 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 CHMP4BP1P59074 171 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 IFRD2Q12894 506 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 MLECQ14165 292 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 SETDB1Q15047 1291 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 LRRFIP1Q32MZ4 808 aaKnown RBP6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 EGFLAMQ63HQ2 1017 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 ZSCAN1Q8NBB4 408 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 REV1Q9UBZ9 1251 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 MAPK8IP1Q9UQF2 711 aa6.98□□□□□ -1.29
HMGB3P31-201ENST00000413333 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 SHISA8B8ZZ34 492 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 OIP5O43482 229 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 PDE4BQ07343 736 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 ZNF787Q6DD87 383 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 LRP10Q7Z4F1 713 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 IRF7Q92985 503 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 RNPC3Q96LT9 517 aaKnown RBP6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 DNAJC7Q99615 494 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 PICK1Q9NRD5 415 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 KLHL3Q9UH77 587 aa6.97□□□□□ -1.29
HMGB3P31-201ENST00000413333 A0A1W2PQH9 124 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 FAM86C2PA6NEL3 165 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 PDPK1O15530 556 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 GJB6O95452 261 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 PGRP06401 933 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 SLFN14P0C7P3 912 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 BCRP11274 1271 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 GRK4P32298 578 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 CD68P34810 354 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 CASP7P55210 303 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 KIF4BQ2VIQ3 1234 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 HP1BP3Q5SSJ5 553 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 TRAPPC3LQ5T215 181 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 TTC6Q86TZ1 520 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 TMEM40Q8WWA1 233 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 KCNK4Q9NYG8 393 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 MSRB2Q9Y3D2 182 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 PRR36Q9H6K5 1346 aa6.96□□□□□ -1.3
HMGB3P31-201ENST00000413333 MEIS3P2A8K0S8 358 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 B2RBV5 119 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 ADAM11O75078 769 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 AOC2O75106 756 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 NID1P14543 1247 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 GUCY2CP25092 1073 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 ETF1P62495 437 aaKnown RBP6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 C6orf15Q6UXA7 325 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 CYFIP1Q7L576 1253 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 MAP4K3Q8IVH8 894 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 TM9SF2Q99805 663 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms