RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 ADGRA2Q96PE1 1338 aa23.08■■□□□ 1.28
ITGA6-204ENST00000412899 PHF20L1A8MW92 1017 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 OSBPP22059 807 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 TFCP2Q12800 502 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
ITGA6-204ENST00000412899 RAET1EQ8TD07 263 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 ARHGAP45Q92619 1136 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 XAGE2Q96GT9 111 aa23.07■■□□□ 1.28
ITGA6-204ENST00000412899 PDS5AQ29RF7 1337 aaKnown RBP23.07■■□□□ 1.28
ITGA6-204ENST00000412899 MYH2Q9UKX2 1941 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 ATRNL1Q5VV63 1379 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 CYP2C8P10632 490 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 BTDP43251 543 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 PICALMQ13492 652 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 GPAT2Q6NUI2 795 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 FASTKD5Q7L8L6 764 aaKnown RBP23.06■■□□□ 1.28
ITGA6-204ENST00000412899 FAM163AQ96GL9 167 aaPredicted RBP23.06■■□□□ 1.28
ITGA6-204ENST00000412899 NEUROD6Q96NK8 337 aa23.06■■□□□ 1.28
ITGA6-204ENST00000412899 DDTLA6NHG4 134 aaPredicted RBP23.05■■□□□ 1.28
ITGA6-204ENST00000412899 PTPRAP18433 802 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 GRK4P32298 578 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 SH3BP5LQ7L8J4 393 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 DOCK2Q92608 1830 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 MROH7-TTC4A0A0A0MT08 1334 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 MYPNQ86TC9 1320 aa23.05■■□□□ 1.28
ITGA6-204ENST00000412899 FCGRTP55899 365 aa23.04■■□□□ 1.28
ITGA6-204ENST00000412899 MTX1Q13505 466 aa23.04■■□□□ 1.28
ITGA6-204ENST00000412899 MTFR1Q15390 333 aa23.04■■□□□ 1.28
ITGA6-204ENST00000412899 GADL1Q6ZQY3 521 aa23.04■■□□□ 1.28
ITGA6-204ENST00000412899 DDX4Q9NQI0 724 aaKnown RBP23.04■■□□□ 1.28
ITGA6-204ENST00000412899 RFX7Q2KHR2 1363 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 CENPFP49454 3210 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 A0A0G2JLL6 359 aaPredicted RBP23.03■■□□□ 1.28
ITGA6-204ENST00000412899 CTNND1O60716 968 aaKnown RBP23.03■■□□□ 1.28
ITGA6-204ENST00000412899 BCRP11274 1271 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 MAP3K10Q02779 954 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 MECOMQ03112 1051 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 GORABQ5T7V8 394 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 PRRT2Q7Z6L0 340 aaPredicted RBP23.03■■□□□ 1.28
ITGA6-204ENST00000412899 BIN2Q9UBW5 565 aaPredicted RBP23.03■■□□□ 1.28
ITGA6-204ENST00000412899 AFG3L2Q9Y4W6 797 aa23.03■■□□□ 1.28
ITGA6-204ENST00000412899 IPO8O15397 1037 aaKnown RBP23.02■■□□□ 1.28
ITGA6-204ENST00000412899 SLURP2P0DP57 97 aa23.02■■□□□ 1.28
ITGA6-204ENST00000412899 GPR75-ASB3A0A0A6YYF3 556 aa23.01■■□□□ 1.27
ITGA6-204ENST00000412899 NKX2-3Q8TAU0 364 aa23.01■■□□□ 1.27
ITGA6-204ENST00000412899 HMG20BQ9P0W2 317 aa23.01■■□□□ 1.27
ITGA6-204ENST00000412899 BCAR3O75815 825 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 LDHCP07864 332 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 UBXN2AP68543 259 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 GSTO1P78417 241 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 PRKCZQ05513 592 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 SPATA5Q8NB90 893 aa23■■□□□ 1.27
ITGA6-204ENST00000412899 FRAT1Q92837 279 aaPredicted RBP23■■□□□ 1.27
ITGA6-204ENST00000412899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23■■□□□ 1.27
ITGA6-204ENST00000412899 TRIM75PA6NK02 468 aa22.99■■□□□ 1.27
ITGA6-204ENST00000412899 GNAI2P04899 355 aa22.99■■□□□ 1.27
ITGA6-204ENST00000412899 RHBDL3P58872 404 aa22.99■■□□□ 1.27
ITGA6-204ENST00000412899 G3BP1Q13283 466 aaKnown RBP eCLIP22.99■■□□□ 1.27
ITGA6-204ENST00000412899 SMCR8Q8TEV9 937 aaPredicted RBP22.99■■□□□ 1.27
ITGA6-204ENST00000412899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.99■■□□□ 1.27
ITGA6-204ENST00000412899 RAI14Q9P0K7 980 aa22.99■■□□□ 1.27
ITGA6-204ENST00000412899 SLC45A1Q9Y2W3 748 aa22.99■■□□□ 1.27
ITGA6-204ENST00000412899 MKI67P46013 3256 aaKnown RBP22.99■■□□□ 1.27
ITGA6-204ENST00000412899 CCL5P13501 91 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 TRIM27P14373 513 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 PI16Q6UXB8 463 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 TBC1D9Q6ZT07 1266 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 ZNF384Q8TF68 577 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 SHISA4Q96DD7 197 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 RNF208Q9H0X6 261 aa22.98■■□□□ 1.27
ITGA6-204ENST00000412899 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.98■■□□□ 1.27
ITGA6-204ENST00000412899 TBC1D12O60347 775 aa22.97■■□□□ 1.27
ITGA6-204ENST00000412899 NPM3O75607 178 aaKnown RBP22.97■■□□□ 1.27
ITGA6-204ENST00000412899 GJB1P08034 283 aa22.97■■□□□ 1.27
ITGA6-204ENST00000412899 ATF7IPQ6VMQ6 1270 aa22.97■■□□□ 1.27
ITGA6-204ENST00000412899 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
ITGA6-204ENST00000412899 SLAIN1Q8ND83 568 aa22.97■■□□□ 1.27
ITGA6-204ENST00000412899 NSUN4Q96CB9 384 aaKnown RBP22.97■■□□□ 1.27
ITGA6-204ENST00000412899 GABRQQ9UN88 632 aa22.97■■□□□ 1.27
ITGA6-204ENST00000412899 COLQQ9Y215 455 aaPredicted RBP22.97■■□□□ 1.27
ITGA6-204ENST00000412899 DOCK1Q14185 1865 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 FAM196BA6NMK8 535 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 H0YGN5 161 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 MAP4K4O95819 1239 aaPredicted RBP22.96■■□□□ 1.27
ITGA6-204ENST00000412899 ARID4AP29374 1257 aaPredicted RBP22.96■■□□□ 1.27
ITGA6-204ENST00000412899 GJA8P48165 433 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 DPF3Q92784 378 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 LRP2BPQ9P2M1 347 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 TNNQ9UQP3 1299 aa22.96■■□□□ 1.27
ITGA6-204ENST00000412899 BRCA2P51587 3418 aa22.95■■□□□ 1.27
ITGA6-204ENST00000412899 TNPO2O14787 897 aaKnown RBP22.95■■□□□ 1.26
ITGA6-204ENST00000412899 OSBPL5Q9H0X9 879 aaPredicted RBP22.95■■□□□ 1.26
ITGA6-204ENST00000412899 AGTPBP1Q9UPW5 1226 aa22.95■■□□□ 1.26
ITGA6-204ENST00000412899 ADCY3O60266 1144 aa22.94■■□□□ 1.26
ITGA6-204ENST00000412899 UQCRFS1P1P0C7P4 283 aa22.94■■□□□ 1.26
ITGA6-204ENST00000412899 FLT3LGP49771 235 aa22.94■■□□□ 1.26
ITGA6-204ENST00000412899 NOL10Q9BSC4 688 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms