RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 RNF43Q68DV7 783 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 POLR3AO14802 1390 aaPredicted RBP7.42□□□□□ -1.22
LINC00342-201ENST00000412393 RALGAPBQ86X10 1494 aa7.42□□□□□ -1.22
LINC00342-201ENST00000412393 FAM83GA6ND36 823 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 SASH3O75995 380 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 PSAPP07602 524 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 VPS72Q15906 364 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 ZNF594Q96JF6 807 aaPredicted RBP7.41□□□□□ -1.22
LINC00342-201ENST00000412393 UBL7Q96S82 380 aaPredicted RBP7.41□□□□□ -1.22
LINC00342-201ENST00000412393 CCDC9Q9Y3X0 531 aaKnown RBP7.41□□□□□ -1.22
LINC00342-201ENST00000412393 GTF3C3Q9Y5Q9 886 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 TONSLQ96HA7 1378 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 PPIP5K1Q6PFW1 1433 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
LINC00342-201ENST00000412393 NUTM2GQ5VZR2 741 aa7.4□□□□□ -1.22
LINC00342-201ENST00000412393 BTG4Q9NY30 223 aa7.4□□□□□ -1.22
LINC00342-201ENST00000412393 PPME1Q9Y570 386 aa7.4□□□□□ -1.22
LINC00342-201ENST00000412393 EVC2Q86UK5 1308 aa7.4□□□□□ -1.22
LINC00342-201ENST00000412393 MICAL2O94851 1124 aa7.39□□□□□ -1.23
LINC00342-201ENST00000412393 GDF6Q6KF10 455 aaPredicted RBP7.39□□□□□ -1.23
LINC00342-201ENST00000412393 ABTB2Q8N961 1025 aa7.39□□□□□ -1.23
LINC00342-201ENST00000412393 UTP4Q969X6 686 aaKnown RBP7.39□□□□□ -1.23
LINC00342-201ENST00000412393 CARD11Q9BXL7 1154 aa7.39□□□□□ -1.23
LINC00342-201ENST00000412393 PRDM11Q9NQV5 511 aa7.39□□□□□ -1.23
LINC00342-201ENST00000412393 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
LINC00342-201ENST00000412393 NRKQ7Z2Y5 1582 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 BRD4O60885 1362 aaPredicted RBP7.38□□□□□ -1.23
LINC00342-201ENST00000412393 KIAA0232Q92628 1395 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 ZC3H6P61129 1189 aaKnown RBP7.38□□□□□ -1.23
LINC00342-201ENST00000412393 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 NLRP13Q86W25 1043 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 ARMC10Q8N2F6 343 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 AGGF1Q8N302 714 aaeCLIP7.38□□□□□ -1.23
LINC00342-201ENST00000412393 MYO19Q96H55 970 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 C7orf69Q9H7B7 122 aa7.38□□□□□ -1.23
LINC00342-201ENST00000412393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
LINC00342-201ENST00000412393 USP6P35125 1406 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 PRR19A6NJB7 356 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 RAD21O60216 631 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 RASA1P20936 1047 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 JAG1P78504 1218 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 CHRNA2Q15822 529 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 C11orf91Q3C1V1 193 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 CLEC10AQ8IUN9 316 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
LINC00342-201ENST00000412393 FAM46AQ96IP4 442 aaKnown RBP7.37□□□□□ -1.23
LINC00342-201ENST00000412393 MYRFLQ96LU7 910 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 KLK14Q9P0G3 267 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 MON2Q7Z3U7 1717 aa7.37□□□□□ -1.23
LINC00342-201ENST00000412393 RGPD5Q99666 1765 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 SBNO2Q9Y2G9 1366 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 USP19O94966 1318 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 SPATA31A5Q5VU36 1347 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 SPATA31A7Q8IWB4 1347 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 PIK3C2AO00443 1686 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 ADAMTS4O75173 837 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 XYLBO75191 536 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 CD68P34810 354 aaPredicted RBP7.36□□□□□ -1.23
LINC00342-201ENST00000412393 DGKZQ13574 1117 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 UCN2Q96RP3 112 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
LINC00342-201ENST00000412393 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
LINC00342-201ENST00000412393 LMO7Q8WWI1 1683 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 THSD7AQ9UPZ6 1657 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 GCP02774 474 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 EVA1CP58658 441 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 KRT27Q7Z3Y8 459 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 TRIM42Q8IWZ5 723 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 FAM83CQ9BQN1 747 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 HIF3AQ9Y2N7 669 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 SSH2Q76I76 1423 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 CAMTA1Q9Y6Y1 1673 aa7.35□□□□□ -1.23
LINC00342-201ENST00000412393 CPDO75976 1380 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 SPATA31A1Q5TZJ5 1347 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 COL18A1P39060 1754 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 SLIT3O75094 1523 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 J3QW42 95 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 CPSF6Q16630 551 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00342-201ENST00000412393 LARP1Q6PKG0 1096 aaKnown RBP7.34□□□□□ -1.23
LINC00342-201ENST00000412393 ACAD11Q709F0 780 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 KLHL23Q8NBE8 558 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.23
LINC00342-201ENST00000412393 BLMP54132 1417 aaPredicted RBP7.34□□□□□ -1.23
LINC00342-201ENST00000412393 CPSF1Q10570 1443 aaKnown RBP7.34□□□□□ -1.23
LINC00342-201ENST00000412393 KTN1Q86UP2 1357 aaKnown RBP7.33□□□□□ -1.24
LINC00342-201ENST00000412393 EP400Q96L91 3159 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 TTC21AQ8NDW8 1320 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 RGPD1P0DJD0 1748 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 OPLAHO14841 1288 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 MMP20O60882 483 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
LINC00342-201ENST00000412393 HDGFL1Q5TGJ6 251 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 POU5F2Q8N7G0 328 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
LINC00342-201ENST00000412393 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms