RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 RHBDL3P58872 404 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 GSTO1P78417 241 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 PPIL2Q13356 520 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 CCL15Q16663 113 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 TTC39AQ5SRH9 613 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
LINC01643-201ENST00000412218 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 ZNF512BQ96KM6 892 aaPredicted RBP12.46□□□□□ -0.41
LINC01643-201ENST00000412218 CRBNQ96SW2 442 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.41
LINC01643-201ENST00000412218 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
LINC01643-201ENST00000412218 IRF6O14896 467 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 CETPP11597 493 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 PPATQ06203 517 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 PICALMQ13492 652 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 FAM43AQ8N2R8 423 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 DOCK2Q92608 1830 aa12.45□□□□□ -0.42
LINC01643-201ENST00000412218 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 PHF20L1A8MW92 1017 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 MAP4K4O95819 1239 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 LDHCP07864 332 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 RGS19P49795 217 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 FBXO46Q6PJ61 603 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 LRP2BPQ9P2M1 347 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 COL2A1P02458 1487 aaPredicted RBP12.44□□□□□ -0.42
LINC01643-201ENST00000412218 MYH2Q9UKX2 1941 aa12.44□□□□□ -0.42
LINC01643-201ENST00000412218 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
LINC01643-201ENST00000412218 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ERO1AQ96HE7 468 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ZCCHC17Q9NP64 241 aaKnown RBP12.43□□□□□ -0.42
LINC01643-201ENST00000412218 ZBTB40Q9NUA8 1239 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 KCNH4Q9UQ05 1017 aa12.43□□□□□ -0.42
LINC01643-201ENST00000412218 IGSF3O75054 1194 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 ZAP70P43403 619 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 SP3Q02447 781 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 AAMPQ13685 434 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 NAA16Q6N069 864 aaPredicted RBP12.42□□□□□ -0.42
LINC01643-201ENST00000412218 OTOP1Q7RTM1 612 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
LINC01643-201ENST00000412218 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 CD99L2Q8TCZ2 262 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
LINC01643-201ENST00000412218 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
LINC01643-201ENST00000412218 TRIM17Q9Y577 477 aa12.42□□□□□ -0.42
LINC01643-201ENST00000412218 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 SOX10P56693 466 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 CAP1Q01518 475 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 MOGSQ13724 837 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 HSP90AB4PQ58FF6 505 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 ADGRA1Q86SQ6 560 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 AACSQ86V21 672 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
LINC01643-201ENST00000412218 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
LINC01643-201ENST00000412218 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
LINC01643-201ENST00000412218 TBC1D12O60347 775 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 TLR2O60603 784 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 HMMRO75330 724 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 PTPRAP18433 802 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 MLLT1Q03111 559 aaPredicted RBP12.4□□□□□ -0.42
LINC01643-201ENST00000412218 C20orf194Q5TEA3 1177 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 ANKRD23Q86SG2 305 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
LINC01643-201ENST00000412218 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
LINC01643-201ENST00000412218 AATFQ9NY61 560 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC01643-201ENST00000412218 FAM196BA6NMK8 535 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 CXCL11O14625 94 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 CTNND1O60716 968 aaKnown RBP12.39□□□□□ -0.43
LINC01643-201ENST00000412218 BAG3O95817 575 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 PLCG2P16885 1265 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 PPP4CP60510 307 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
LINC01643-201ENST00000412218 FLT1P17948 1338 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 A0A0G2JLL6 359 aaPredicted RBP12.38□□□□□ -0.43
LINC01643-201ENST00000412218 PDHXO00330 501 aa12.38□□□□□ -0.43
LINC01643-201ENST00000412218 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
LINC01643-201ENST00000412218 PRRT2Q7Z6L0 340 aaPredicted RBP12.38□□□□□ -0.43
LINC01643-201ENST00000412218 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms