RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ZKSCAN3Q9BRR0 538 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 DUOX1Q9NRD9 1551 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 BRAPQ7Z569 592 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 PHKBQ93100 1093 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 ALG1Q9BT22 464 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 GYS1P13807 737 aa28.6■■■□□ 2.17
VRK2-202ENST00000412104 WTAPQ15007 396 aa28.6■■■□□ 2.17
VRK2-202ENST00000412104 SLC27A3Q5K4L6 730 aa28.6■■■□□ 2.17
VRK2-202ENST00000412104 SLC51AQ86UW1 340 aa28.6■■■□□ 2.17
VRK2-202ENST00000412104 AIFM3Q96NN9 605 aa28.6■■■□□ 2.17
VRK2-202ENST00000412104 ZBTB22O15209 634 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 KIF23Q02241 960 aaPredicted RBP28.59■■■□□ 2.17
VRK2-202ENST00000412104 RBM43Q6ZSC3 357 aaKnown RBP28.59■■■□□ 2.17
VRK2-202ENST00000412104 RTEL1Q9NZ71 1219 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 ANKIB1Q9P2G1 1089 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 KIF28PB7ZC32 967 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 RANBP6O60518 1105 aaKnown RBP28.59■■■□□ 2.17
VRK2-202ENST00000412104 PRDX5P30044 214 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 SYNE3Q6ZMZ3 975 aa28.59■■■□□ 2.17
VRK2-202ENST00000412104 KIAA1551Q9HCM1 1747 aa28.58■■■□□ 2.17
VRK2-202ENST00000412104 ERICH2A1L162 156 aa28.58■■■□□ 2.17
VRK2-202ENST00000412104 SMIM22K7EJ46 135 aa28.58■■■□□ 2.17
VRK2-202ENST00000412104 POLR3DP05423 398 aaPredicted RBP28.58■■■□□ 2.17
VRK2-202ENST00000412104 IARSP41252 1262 aaKnown RBP28.58■■■□□ 2.17
VRK2-202ENST00000412104 HS1BP3Q53T59 392 aa28.58■■■□□ 2.17
VRK2-202ENST00000412104 LAMB1P07942 1786 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 KRT27Q7Z3Y8 459 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 CCAR1Q8IX12 1150 aaKnown RBP28.57■■■□□ 2.16
VRK2-202ENST00000412104 LEMD3Q9Y2U8 911 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 STK36Q9NRP7 1315 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 MYSM1Q5VVJ2 828 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 CKAP2LQ8IYA6 745 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 ESR2Q92731 530 aa28.57■■■□□ 2.16
VRK2-202ENST00000412104 RPGRQ92834 1020 aaKnown RBP28.56■■■□□ 2.16
VRK2-202ENST00000412104 UBAC1Q9BSL1 405 aa28.56■■■□□ 2.16
VRK2-202ENST00000412104 XDHP47989 1333 aa28.56■■■□□ 2.16
VRK2-202ENST00000412104 CYP2D7A0A087X1C5 515 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 TRIM37O94972 964 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 CLCN1P35523 988 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 ME1P48163 572 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 TYRO3Q06418 890 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 TMTC2Q8N394 836 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 GOLPH3LQ9H4A5 285 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 POLR3EQ9NVU0 708 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 AATFQ9NY61 560 aaKnown RBP eCLIP28.55■■■□□ 2.16
VRK2-202ENST00000412104 JAG2Q9Y219 1238 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 MYH2Q9UKX2 1941 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 KRT40Q6A162 431 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 TMED8Q6PL24 325 aaPredicted RBP28.55■■■□□ 2.16
VRK2-202ENST00000412104 CLIC4Q9Y696 253 aa28.55■■■□□ 2.16
VRK2-202ENST00000412104 ST5P78524 1137 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 SSRP1Q08945 709 aaKnown RBP28.54■■■□□ 2.16
VRK2-202ENST00000412104 RTN1Q16799 776 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 CRY2Q49AN0 593 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 CTR9Q6PD62 1173 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 LINC00301Q8NCQ3 95 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 USP25Q9UHP3 1055 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 MRVI1Q9Y6F6 885 aa28.54■■■□□ 2.16
VRK2-202ENST00000412104 TNKSO95271 1327 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 FMNL1O95466 1100 aaPredicted RBP28.53■■■□□ 2.16
VRK2-202ENST00000412104 SERPINB2P05120 415 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 IFNAR1P17181 557 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 RCAN1P53805 252 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 SLC26A6Q9BXS9 759 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 CRNKL1Q9BZJ0 848 aaKnown RBP28.53■■■□□ 2.16
VRK2-202ENST00000412104 YEATS4O95619 227 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 SEC23AQ15436 765 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 CCDC73Q6ZRK6 1079 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 ZSCAN30Q86W11 494 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 ZNF654Q8IZM8 581 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 PCDHA7Q9UN72 937 aa28.53■■■□□ 2.16
VRK2-202ENST00000412104 STK38Q15208 465 aa28.52■■■□□ 2.16
VRK2-202ENST00000412104 SPTY2D1Q68D10 685 aaPredicted RBP28.52■■■□□ 2.16
VRK2-202ENST00000412104 DLEC1Q9Y238 1755 aa28.52■■■□□ 2.16
VRK2-202ENST00000412104 EP400Q96L91 3159 aa28.52■■■□□ 2.16
VRK2-202ENST00000412104 FGRP09769 529 aa28.51■■■□□ 2.16
VRK2-202ENST00000412104 PCP11498 1178 aaKnown RBP28.51■■■□□ 2.16
VRK2-202ENST00000412104 DZIP1Q86YF9 867 aaKnown RBP28.51■■■□□ 2.16
VRK2-202ENST00000412104 KCNG4Q8TDN1 519 aa28.51■■■□□ 2.16
VRK2-202ENST00000412104 DCP1AQ9NPI6 582 aaPredicted RBP28.51■■■□□ 2.16
VRK2-202ENST00000412104 USP17L12C9JPN9 530 aa28.51■■■□□ 2.15
VRK2-202ENST00000412104 USP17L21D6R901 530 aa28.51■■■□□ 2.15
VRK2-202ENST00000412104 SNW1Q13573 536 aaKnown RBP28.51■■■□□ 2.15
VRK2-202ENST00000412104 UBE2Q2LH0YL09 131 aa28.5■■■□□ 2.15
VRK2-202ENST00000412104 FAM160A1Q05DH4 1040 aa28.5■■■□□ 2.15
VRK2-202ENST00000412104 TRIM29Q14134 588 aa28.5■■■□□ 2.15
VRK2-202ENST00000412104 FSIP1Q8NA03 581 aa28.5■■■□□ 2.15
VRK2-202ENST00000412104 TDRD7Q8NHU6 1098 aaKnown RBP28.5■■■□□ 2.15
VRK2-202ENST00000412104 GPSM2P81274 684 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 ADALQ6DHV7 355 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 C15orf52Q6ZUT6 534 aaKnown RBP28.49■■■□□ 2.15
VRK2-202ENST00000412104 ZNF804AQ7Z570 1209 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 ENGASEQ8NFI3 743 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 WDR66Q8TBY9 1149 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 FAM200AQ8TCP9 573 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 ZSCAN10Q96SZ4 725 aaPredicted RBP28.49■■■□□ 2.15
VRK2-202ENST00000412104 ATP8A2Q9NTI2 1148 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 TAOK2Q9UL54 1235 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 CCDC196A0A1B0GTZ2 297 aa28.49■■■□□ 2.15
VRK2-202ENST00000412104 ANO1Q5XXA6 986 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms