RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
CPNE1-206ENST00000412056 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
CPNE1-206ENST00000412056 MBD4O95243 580 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-206ENST00000412056 SH3BP5LQ7L8J4 393 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 SAPCD2Q86UD0 394 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 APPBP2Q92624 585 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 PUS7LQ9H0K6 701 aaKnown RBP16.84■□□□□ 0.29
CPNE1-206ENST00000412056 OSBPL5Q9H0X9 879 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-206ENST00000412056 ARMT1Q9H993 441 aa16.84■□□□□ 0.29
CPNE1-206ENST00000412056 COL2A1P02458 1487 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-206ENST00000412056 DDTLA6NHG4 134 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 ZFYP08048 801 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 FLT1P17948 1338 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 HUNKP57058 714 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 FKBP1BP68106 108 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 ZSCAN29Q8IWY8 852 aaPredicted RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 OSBP2Q969R2 916 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
CPNE1-206ENST00000412056 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 ANGEL1Q9UNK9 670 aaKnown RBP16.83■□□□□ 0.28
CPNE1-206ENST00000412056 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
CPNE1-206ENST00000412056 UBE2Q2LH0YL09 131 aa16.82■□□□□ 0.28
CPNE1-206ENST00000412056 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
CPNE1-206ENST00000412056 ARMC9Q7Z3E5 817 aa16.82■□□□□ 0.28
CPNE1-206ENST00000412056 MYH8P13535 1937 aa16.82■□□□□ 0.28
CPNE1-206ENST00000412056 LAMB1P07942 1786 aa16.82■□□□□ 0.28
CPNE1-206ENST00000412056 RASSF10A6NK89 507 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 M0R2C6 588 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
CPNE1-206ENST00000412056 USP5P45974 858 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
CPNE1-206ENST00000412056 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 CRNKL1Q9BZJ0 848 aaKnown RBP16.81■□□□□ 0.28
CPNE1-206ENST00000412056 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
CPNE1-206ENST00000412056 DOCK1Q14185 1865 aa16.81■□□□□ 0.28
CPNE1-206ENST00000412056 PRKAB2O43741 272 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 PPP1R12BO60237 982 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-206ENST00000412056 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 DEFB115Q30KQ5 88 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 PAXIP1Q6ZW49 1069 aaPredicted RBP16.8■□□□□ 0.28
CPNE1-206ENST00000412056 MIGA2Q7L4E1 593 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
CPNE1-206ENST00000412056 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
CPNE1-206ENST00000412056 SLC4A8Q2Y0W8 1093 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 CYP4F22Q6NT55 531 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 HOOK2Q96ED9 719 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 HHIPL1Q96JK4 782 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 PALD1Q9ULE6 856 aa16.79■□□□□ 0.28
CPNE1-206ENST00000412056 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 GPAA1O43292 621 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 SDSP20132 328 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 IREB2P48200 963 aaKnown RBP16.78■□□□□ 0.28
CPNE1-206ENST00000412056 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 RGMBQ6NW40 437 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
CPNE1-206ENST00000412056 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-206ENST00000412056 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-206ENST00000412056 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
CPNE1-206ENST00000412056 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 VEGFBP49765 207 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 GRM1Q13255 1194 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-206ENST00000412056 CCDC129Q6ZRS4 1044 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.77■□□□□ 0.288e-6■■□□□ 11.7
CPNE1-206ENST00000412056 KLRG1Q96E93 195 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 CLMNQ96JQ2 1002 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 CAPNS2Q96L46 248 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 FAM227BQ96M60 508 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 WRNIP1Q96S55 665 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 ZNF341Q9BYN7 854 aa16.77■□□□□ 0.28
CPNE1-206ENST00000412056 PHIPQ8WWQ0 1821 aa16.76■□□□□ 0.27
CPNE1-206ENST00000412056 INPP5BP32019 993 aa16.76■□□□□ 0.27
CPNE1-206ENST00000412056 ZNF157P51786 506 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-206ENST00000412056 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-206ENST00000412056 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
CPNE1-206ENST00000412056 DHX36Q9H2U1 1008 aaKnown RBP16.76■□□□□ 0.27
CPNE1-206ENST00000412056 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
CPNE1-206ENST00000412056 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 SLC10A3P09131 477 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 CYP2D6P10635 497 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 MAP3K9P80192 1104 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 MAP3K10Q02779 954 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 EVX2Q03828 476 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 TICAM2Q86XR7 235 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms