RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 NUCB1Q02818 461 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 RASAL3Q86YV0 1011 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 CSRNP1Q96S65 589 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 SAP30BPQ9UHR5 308 aaKnown RBP14.51□□□□□ -0.09
NEDD1-202ENST00000411739 RFX7Q2KHR2 1363 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 ENTPD3O75355 529 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 IREB2P48200 963 aaKnown RBP14.51□□□□□ -0.09
NEDD1-202ENST00000411739 PDE1AP54750 535 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 CNKSR2Q8WXI2 1034 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 ZKSCAN4Q969J2 545 aaPredicted RBP14.51□□□□□ -0.09
NEDD1-202ENST00000411739 HHIPL1Q96JK4 782 aa14.51□□□□□ -0.09
NEDD1-202ENST00000411739 TTC41PQ6P2S7 1318 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 ADD2P35612 726 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 SLC10A4Q96EP9 437 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 ARMT1Q9H993 441 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 ELP3Q9H9T3 547 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 DOCK2Q92608 1830 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 MAGEB6P1A0A0J9YX57 407 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 ERC2O15083 957 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 SLC10A3P09131 477 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 KIF23Q02241 960 aaPredicted RBP14.5□□□□□ -0.09
NEDD1-202ENST00000411739 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.5□□□□□ -0.09
NEDD1-202ENST00000411739 LCORLQ8N3X6 602 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 WRNIP1Q96S55 665 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 RIOK1Q9BRS2 568 aaKnown RBP14.5□□□□□ -0.09
NEDD1-202ENST00000411739 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
NEDD1-202ENST00000411739 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
NEDD1-202ENST00000411739 GLRX3O76003 335 aaKnown RBP14.49□□□□□ -0.09
NEDD1-202ENST00000411739 INPP5BP32019 993 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 CCDC102AQ96A19 550 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 PRKAB2O43741 272 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 VGLL4Q14135 290 aa14.49□□□□□ -0.09
NEDD1-202ENST00000411739 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.49□□□□□ -0.09
NEDD1-202ENST00000411739 FLT1P17948 1338 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 MBD4O95243 580 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 HSPA1AP0DMV8 641 aaKnown RBP14.48□□□□□ -0.09
NEDD1-202ENST00000411739 HSPA1BP0DMV9 641 aaKnown RBP14.48□□□□□ -0.09
NEDD1-202ENST00000411739 PLCG2P16885 1265 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 USP5P45974 858 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 PLEKHM2Q8IWE5 1019 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.48□□□□□ -0.09
NEDD1-202ENST00000411739 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 PUS7LQ9H0K6 701 aaKnown RBP14.48□□□□□ -0.09
NEDD1-202ENST00000411739 TSKSQ9UJT2 592 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 PDE4AP27815 886 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 STAP2Q9UGK3 403 aa14.48□□□□□ -0.09
NEDD1-202ENST00000411739 GJA5P36382 358 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 EVX2Q03828 476 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 NOGQ13253 232 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 DCAF15Q66K64 600 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 SKAP1Q86WV1 359 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 FSD1Q9BTV5 496 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 ZNF341Q9BYN7 854 aa14.47□□□□□ -0.09
NEDD1-202ENST00000411739 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.47□□□□□ -0.09
NEDD1-202ENST00000411739 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
NEDD1-202ENST00000411739 ATRNL1Q5VV63 1379 aa14.46□□□□□ -0.09
NEDD1-202ENST00000411739 MAP2K2P36507 400 aa14.46□□□□□ -0.09
NEDD1-202ENST00000411739 SPRYD7Q5W111 196 aa14.46□□□□□ -0.09
NEDD1-202ENST00000411739 SEC62Q99442 399 aaKnown RBP14.46□□□□□ -0.09
NEDD1-202ENST00000411739 RNF113AO15541 343 aaKnown RBP14.46□□□□□ -0.1
NEDD1-202ENST00000411739 CENPBP07199 599 aaPredicted RBP14.46□□□□□ -0.1
NEDD1-202ENST00000411739 UBE3CQ15386 1083 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 OSBP2Q969R2 916 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 OPTNQ96CV9 577 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 WNK4Q96J92 1243 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 WBP1LQ9NX94 342 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 CSADQ9Y600 493 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 SNCAIPQ9Y6H5 919 aa14.46□□□□□ -0.1
NEDD1-202ENST00000411739 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
NEDD1-202ENST00000411739 RRP1BQ14684 758 aaKnown RBP14.45□□□□□ -0.1
NEDD1-202ENST00000411739 CCDC84Q86UT8 332 aaPredicted RBP14.45□□□□□ -0.1
NEDD1-202ENST00000411739 HOOK2Q96ED9 719 aa14.45□□□□□ -0.1
NEDD1-202ENST00000411739 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
NEDD1-202ENST00000411739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEDD1-202ENST00000411739 OTOFQ9HC10 1997 aa14.45□□□□□ -0.1
NEDD1-202ENST00000411739 CDK5RAP2Q96SN8 1893 aa14.45□□□□□ -0.1
NEDD1-202ENST00000411739 PHF20L1A8MW92 1017 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 SMIM22K7EJ46 135 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 M0R2C6 588 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 FOXN1O15353 648 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 IGSF3O75054 1194 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
NEDD1-202ENST00000411739 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 AIDAQ96BJ3 306 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
NEDD1-202ENST00000411739 CYP2D6P10635 497 aa14.44□□□□□ -0.1
NEDD1-202ENST00000411739 SHROOM1Q2M3G4 852 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-202ENST00000411739 PLCD1P51178 756 aa14.43□□□□□ -0.1
NEDD1-202ENST00000411739 MAP2K1Q02750 393 aaPredicted RBP14.43□□□□□ -0.1
NEDD1-202ENST00000411739 ZNF112Q9UJU3 913 aa14.43□□□□□ -0.1
NEDD1-202ENST00000411739 CYP2D7A0A087X1C5 515 aa14.43□□□□□ -0.1
NEDD1-202ENST00000411739 MCM9Q9NXL9 1143 aa14.43□□□□□ -0.1
NEDD1-202ENST00000411739 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
NEDD1-202ENST00000411739 SLC4A4Q9Y6R1 1079 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms