RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 MIGA2Q7L4E1 593 aa28.56■■■□□ 2.16
R3HCC1-202ENST00000411463 MIGA1Q8NAN2 632 aa28.56■■■□□ 2.16
R3HCC1-202ENST00000411463 CLMNQ96JQ2 1002 aa28.56■■■□□ 2.16
R3HCC1-202ENST00000411463 WBP1LQ9NX94 342 aa28.56■■■□□ 2.16
R3HCC1-202ENST00000411463 CERS3Q8IU89 383 aa28.55■■■□□ 2.16
R3HCC1-202ENST00000411463 CSRNP1Q96S65 589 aa28.55■■■□□ 2.16
R3HCC1-202ENST00000411463 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.55■■■□□ 2.16
R3HCC1-202ENST00000411463 THSD7BQ9C0I4 1608 aa28.55■■■□□ 2.16
R3HCC1-202ENST00000411463 MX1P20591 662 aa28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 DYNLL1P63167 89 aaKnown RBP28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 MAP3K9P80192 1104 aa28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 KIF23Q02241 960 aaPredicted RBP28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 SH3BP5LQ7L8J4 393 aa28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.54■■■□□ 2.16
R3HCC1-202ENST00000411463 DDTLA6NHG4 134 aaPredicted RBP28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 ERC2O15083 957 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 ZNF341Q9BYN7 854 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 MYO5AQ9Y4I1 1855 aaKnown RBP28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 ZNF532Q9HCE3 1301 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 DOCK2Q92608 1830 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 B4GALNT3Q6L9W6 998 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 WRNIP1Q96S55 665 aa28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 OSBPL5Q9H0X9 879 aaPredicted RBP28.53■■■□□ 2.16
R3HCC1-202ENST00000411463 TGFBRAP1Q8WUH2 860 aa28.52■■■□□ 2.16
R3HCC1-202ENST00000411463 AIDAQ96BJ3 306 aa28.52■■■□□ 2.16
R3HCC1-202ENST00000411463 BEGAINQ9BUH8 593 aa28.52■■■□□ 2.16
R3HCC1-202ENST00000411463 SALL3Q9BXA9 1300 aa28.51■■■□□ 2.16
R3HCC1-202ENST00000411463 TCRBV5S4A2TA0A5A2 114 aa28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 GLRX3O76003 335 aaKnown RBP28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 VGLL4Q14135 290 aa28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 SPRYD7Q5W111 196 aa28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 PI4K2BQ8TCG2 481 aa28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 CSADQ9Y600 493 aa28.51■■■□□ 2.15
R3HCC1-202ENST00000411463 ATRNL1Q5VV63 1379 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 MAGEB6P1A0A0J9YX57 407 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 ADD2P35612 726 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 MKRN3Q13064 507 aaKnown RBP28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 MAPKAPK5Q8IW41 473 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 LNPKQ9C0E8 428 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 ELP3Q9H9T3 547 aa28.5■■■□□ 2.15
R3HCC1-202ENST00000411463 ZSCAN25Q6NSZ9 544 aa28.49■■■□□ 2.15
R3HCC1-202ENST00000411463 REM2Q8IYK8 340 aaPredicted RBP28.49■■■□□ 2.15
R3HCC1-202ENST00000411463 RIOK1Q9BRS2 568 aaKnown RBP28.49■■■□□ 2.15
R3HCC1-202ENST00000411463 COL2A1P02458 1487 aaPredicted RBP28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 CHD1LQ86WJ1 897 aa28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 ZKSCAN4Q969J2 545 aaPredicted RBP28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 WNK4Q96J92 1243 aa28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 ZNF112Q9UJU3 913 aa28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 FLT1P17948 1338 aa28.48■■■□□ 2.15
R3HCC1-202ENST00000411463 ZBTB48P10074 688 aaPredicted RBP28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 MAP3K10Q02779 954 aa28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 NUCB1Q02818 461 aa28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 UBE3CQ15386 1083 aa28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 KBTBD3Q8NAB2 608 aa28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 STAP2Q9UGK3 403 aa28.47■■■□□ 2.15
R3HCC1-202ENST00000411463 FOXN1O15353 648 aa28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 USP5P45974 858 aa28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 DHX36Q9H2U1 1008 aaKnown RBP28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 INPP5BP32019 993 aa28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 PDE1AP54750 535 aa28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 SLFNL1Q499Z3 407 aa28.46■■■□□ 2.15
R3HCC1-202ENST00000411463 OPTNQ96CV9 577 aa28.45■■■□□ 2.14
R3HCC1-202ENST00000411463 SNCAIPQ9Y6H5 919 aa28.45■■■□□ 2.14
R3HCC1-202ENST00000411463 TBC1D12O60347 775 aa28.44■■■□□ 2.14
R3HCC1-202ENST00000411463 CHGBP05060 677 aa28.44■■■□□ 2.14
R3HCC1-202ENST00000411463 CRNKL1Q9BZJ0 848 aaKnown RBP28.44■■■□□ 2.14
R3HCC1-202ENST00000411463 PI4KBQ9UBF8 816 aa28.44■■■□□ 2.14
R3HCC1-202ENST00000411463 PHF20L1A8MW92 1017 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 CA12O43570 354 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 SLURP2P0DP57 97 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 GJA5P36382 358 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 CNKSR2Q8WXI2 1034 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 PALD1Q9ULE6 856 aa28.43■■■□□ 2.14
R3HCC1-202ENST00000411463 SPDYE5A6NIY4 337 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 SREBF2Q12772 1141 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 ERO1BQ86YB8 467 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 LCORLQ8N3X6 602 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 SAP30BPQ9UHR5 308 aaKnown RBP28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 AK9Q5TCS8 1911 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 OTOFQ9HC10 1997 aa28.42■■■□□ 2.14
R3HCC1-202ENST00000411463 MANSC4A6NHS7 340 aaPredicted RBP28.41■■■□□ 2.14
R3HCC1-202ENST00000411463 TM4SF4P48230 202 aa28.41■■■□□ 2.14
R3HCC1-202ENST00000411463 CTCFP49711 727 aaPredicted RBP28.41■■■□□ 2.14
R3HCC1-202ENST00000411463 OTUD5Q96G74 571 aa28.41■■■□□ 2.14
R3HCC1-202ENST00000411463 ARMT1Q9H993 441 aa28.41■■■□□ 2.14
R3HCC1-202ENST00000411463 MBD4O95243 580 aa28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 ZFYP08048 801 aaPredicted RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 LRRFIP1Q32MZ4 808 aaKnown RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 NOL9Q5SY16 702 aaKnown RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 HERC5Q9UII4 1024 aaKnown RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 FAM196BA6NMK8 535 aa28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 RNF113AO15541 343 aaKnown RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 INHBEP58166 350 aa28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 FOXP4Q8IVH2 680 aaPredicted RBP28.4■■■□□ 2.14
R3HCC1-202ENST00000411463 HLA-DOAP06340 250 aa28.39■■■□□ 2.13
R3HCC1-202ENST00000411463 FSD1Q9BTV5 496 aa28.39■■■□□ 2.13
R3HCC1-202ENST00000411463 PUS7LQ9H0K6 701 aaKnown RBP28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms