RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ZC3H12AQ5D1E8 599 aaKnown RBP3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 PPM1JQ5JR12 505 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 NXPE4Q6UWF7 544 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 SPOCD1Q6ZMY3 1216 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 C12orf40Q86WS4 652 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 TOP6BLQ8N6T0 577 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 TMC1Q8TDI8 760 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 GPBAR1Q8TDU6 330 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 BCO2Q9BYV7 579 aa3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 RC3H2Q9HBD1 1191 aaKnown RBP3.29□□□□□ -1.88
RNU2-55P-201ENST00000411146 ZNF503-AS2A6NEH8 195 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 DCDC2CA8MYV0 355 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 FBXO24O75426 580 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 SLFN14P0C7P3 912 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 ARNTP27540 789 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 CDK8P49336 464 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 PTPN12Q05209 780 aaKnown RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 PTPN11Q06124 597 aaPredicted RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 MESP2Q0VG99 397 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 AP3B2Q13367 1082 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 NKPD1Q17RQ9 610 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 CYP27C1Q4G0S4 372 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 RPS26P11Q5JNZ5 115 aaPredicted RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 MAP1SQ66K74 1059 aaPredicted RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 DTHD1Q6ZMT9 781 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 CILP2Q8IUL8 1156 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 PI4K2BQ8TCG2 481 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 FAM168AQ92567 244 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 PIDD1Q9HB75 910 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 GPN3Q9UHW5 284 aaPredicted RBP3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 PCOLCE2Q9UKZ9 415 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 WWC3Q9ULE0 1092 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 AKAP2Q9Y2D5 859 aa3.28□□□□□ -1.88
RNU2-55P-201ENST00000411146 SYNGAP1Q96PV0 1343 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 DBX1A6NMT0 343 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 PRR33A8MZF0 331 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 NDUFB5O43674 189 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 EIF4EBP3O60516 100 aaPredicted RBP3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 EOMESO95936 686 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 PRKCQQ04759 706 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 ZNF252P-AS1Q0IIN9 211 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 FBLN7Q53RD9 439 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 TMC7Q7Z402 723 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 SULF2Q8IWU5 870 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 C3orf58Q8NDZ4 430 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 RIN3Q8TB24 985 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 LIN37Q96GY3 246 aaPredicted RBP3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 ARID3AQ99856 593 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 ATXN3LQ9H3M9 355 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 TMEM39AQ9NV64 488 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 CACNA2D2Q9NY47 1150 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 VAV3Q9UKW4 847 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 MTMR7Q9Y216 660 aa3.27□□□□□ -1.89
RNU2-55P-201ENST00000411146 CEACAM5P06731 702 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 PDE3BQ13370 1112 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 DSC3Q14574 896 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 INPP5AQ14642 412 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 IFI16Q16666 785 aaKnown RBP3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 ATG4DQ86TL0 474 aaPredicted RBP3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 SPACA3Q8IXA5 215 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 RNF214Q8ND24 703 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 DDX54Q8TDD1 881 aaKnown RBP3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 OSBPL7Q9BZF2 842 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 DNAJC25Q9H1X3 360 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 TNKS2Q9H2K2 1166 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 ZFYVE1Q9HBF4 777 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 SSU72Q9NP77 194 aaKnown RBP3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 KRT82Q9NSB4 513 aa3.26□□□□□ -1.89
RNU2-55P-201ENST00000411146 WASH4PA8MWX3 477 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 BIN1O00499 593 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 ENC1O14682 589 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 KRT1P04264 644 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 NEFLP07196 543 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 RING1Q06587 406 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 HP1BP3Q5SSJ5 553 aaPredicted RBP3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 TPTE2Q6XPS3 522 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 STK11IPQ8N1F8 1099 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 RETREG2Q8NC44 543 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 MISP3Q96FF7 219 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 NECAB3Q96P71 396 aaPredicted RBP3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 RBCK1Q9BYM8 510 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 FBRSQ9HAH7 460 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 CBX8Q9HC52 389 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 RNF19AQ9NV58 838 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 C19orf73Q9NVV2 129 aa3.25□□□□□ -1.89
RNU2-55P-201ENST00000411146 TMEM265A0A087WTH1 108 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 PNMA6FA0A0J9YX94 578 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 SOWAHDA6NJG2 315 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 FARP2O94887 1054 aaPredicted RBP3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 ZNF865P0CJ78 1059 aaPredicted RBP3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 NME2P22392 152 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 ERVK-24P63145 666 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 ZP2Q05996 745 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 NKG7Q16617 165 aa3.24□□□□□ -1.89
RNU2-55P-201ENST00000411146 MLANAQ16655 118 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms