RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 CLASP1Q7Z460 1538 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 SMTNP53814 917 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 ZNF772Q68DY9 489 aaPredicted RBP10.24□□□□□ -0.77
PBRM1-208ENST00000410007 GIGYF2Q6Y7W6 1299 aaKnown RBP10.24□□□□□ -0.77
PBRM1-208ENST00000410007 LRRC45Q96CN5 670 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 USP40Q9NVE5 1235 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 KRT86O43790 486 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 CCDC175P0C221 793 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 HSPA4P34932 840 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 MAP2K1Q02750 393 aaPredicted RBP10.24□□□□□ -0.77
PBRM1-208ENST00000410007 KIF5AQ12840 1032 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
PBRM1-208ENST00000410007 PLIN2Q99541 437 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 CEP83Q9Y592 693 aa10.24□□□□□ -0.77
PBRM1-208ENST00000410007 FSD2A1L4K1 749 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 CRKLP46109 303 aaKnown RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 UBXN1Q04323 297 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 TCP10Q12799 353 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 TTC38Q5R3I4 469 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 C2CD5Q86YS7 1000 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 NDUFB9Q9Y6M9 179 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 KDM2BQ8NHM5 1336 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 KDM5CP41229 1560 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 ERBB3P21860 1342 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 A0A1B0GVL5 298 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 CUTAO60888 179 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 MYL5Q02045 173 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 PPARAQ07869 468 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 ZYXQ15942 572 aaKnown RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 CCDC97Q96F63 343 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 ZNF408Q9H9D4 720 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 COPRSQ9NQ92 184 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 FRMD4BQ9Y2L6 1034 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 PREX2Q70Z35 1606 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 EAF2Q96CJ1 260 aaPredicted RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 FAM212AQ96EL1 285 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 PLEKHF1Q96S99 279 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 E7EWF7 191 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 CCNT1O60563 726 aaKnown RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 UBE4AQ14139 1066 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 CNNM4Q6P4Q7 775 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 PKD2L1Q9P0L9 805 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 KCNH3Q9ULD8 1083 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 ASAP1Q9ULH1 1129 aa10.23□□□□□ -0.77
PBRM1-208ENST00000410007 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
PBRM1-208ENST00000410007 PTGS1P23219 599 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 TMC4Q7Z404 712 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
PBRM1-208ENST00000410007 TRAF5O00463 557 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CHURC1Q8WUH1 139 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 USP17L12C9JPN9 530 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 USP17L21D6R901 530 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 PDE6AP16499 860 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
PBRM1-208ENST00000410007 MSL1Q68DK7 614 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 IFT74Q96LB3 600 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 PRIMPOLQ96LW4 560 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
PBRM1-208ENST00000410007 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CTAGE15A4D2H0 777 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 ARHGEF35A5YM69 484 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CTAGE8P0CG41 777 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 EPB41P11171 864 aaKnown RBP10.22□□□□□ -0.77
PBRM1-208ENST00000410007 TXKP42681 527 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 GYG1P46976 350 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 LMAN1P49257 510 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 ARID5AQ03989 594 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 KRT40Q6A162 431 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CTAGE6Q86UF2 777 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CTAGE4Q8IX94 777 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 HAUS7Q99871 368 aa10.22□□□□□ -0.77
PBRM1-208ENST00000410007 CA8P35219 290 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 CHRNDQ07001 517 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 PDE4DQ08499 809 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 CNGA4Q8IV77 575 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 CPXCR1Q8N123 301 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 GPR108Q9NPR9 543 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.77
PBRM1-208ENST00000410007 LRWD1Q9UFC0 647 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 EXOC7Q9UPT5 735 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 SSH2Q76I76 1423 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 NOP56O00567 594 aaKnown RBP10.21□□□□□ -0.77
PBRM1-208ENST00000410007 CHMP2AO43633 222 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 PDE8BO95263 885 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 DCAF15Q66K64 600 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 NSMFQ6X4W1 530 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 FNBP1Q96RU3 617 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
PBRM1-208ENST00000410007 RASAL2Q9UJF2 1139 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 IKBKGQ9Y6K9 419 aa10.21□□□□□ -0.77
PBRM1-208ENST00000410007 PRR36Q9H6K5 1346 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 CIAO1O76071 339 aa10.21□□□□□ -0.78
PBRM1-208ENST00000410007 IRX3P78415 501 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms