RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 AACSQ86V21 672 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 RHPN1Q8TCX5 695 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 MYO5AQ9Y4I1 1855 aaKnown RBP21.7■■□□□ 1.06
LSM5-204ENST00000409909 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
LSM5-204ENST00000409909 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
LSM5-204ENST00000409909 PICALMQ13492 652 aa21.69■■□□□ 1.06
LSM5-204ENST00000409909 ERO1BQ86YB8 467 aa21.69■■□□□ 1.06
LSM5-204ENST00000409909 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.69■■□□□ 1.06
LSM5-204ENST00000409909 BRI3BPQ8WY22 251 aa21.69■■□□□ 1.06
LSM5-204ENST00000409909 CHMP4BQ9H444 224 aaKnown RBP21.69■■□□□ 1.06
LSM5-204ENST00000409909 PIH1D3Q9NQM4 214 aaKnown RBP21.69■■□□□ 1.06
LSM5-204ENST00000409909 APBB1O00213 710 aa21.68■■□□□ 1.06
LSM5-204ENST00000409909 HMMRO75330 724 aa21.68■■□□□ 1.06
LSM5-204ENST00000409909 SLURP2P0DP57 97 aa21.68■■□□□ 1.06
LSM5-204ENST00000409909 GTF2A2P52657 109 aa21.68■■□□□ 1.06
LSM5-204ENST00000409909 PHF20L1A8MW92 1017 aa21.67■■□□□ 1.06
LSM5-204ENST00000409909 IRF6O14896 467 aa21.67■■□□□ 1.06
LSM5-204ENST00000409909 NAA16Q6N069 864 aaPredicted RBP21.67■■□□□ 1.06
LSM5-204ENST00000409909 CTU1Q7Z7A3 348 aaKnown RBP21.67■■□□□ 1.06
LSM5-204ENST00000409909 ADGRA1Q86SQ6 560 aa21.67■■□□□ 1.06
LSM5-204ENST00000409909 NDUFB9Q9Y6M9 179 aa21.67■■□□□ 1.06
LSM5-204ENST00000409909 CCL15-CCL14A0A0B4J2E2 113 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
LSM5-204ENST00000409909 MAP3K10Q02779 954 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 CRHR2Q13324 411 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 CCL15Q16663 113 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 OTUD7BQ6GQQ9 843 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 ZSCAN29Q8IWY8 852 aaPredicted RBP21.66■■□□□ 1.06
LSM5-204ENST00000409909 SH3RF3Q8TEJ3 882 aaPredicted RBP21.66■■□□□ 1.06
LSM5-204ENST00000409909 DOCK2Q92608 1830 aa21.66■■□□□ 1.06
LSM5-204ENST00000409909 MAP4K4O95819 1239 aaPredicted RBP21.65■■□□□ 1.06
LSM5-204ENST00000409909 PPIL2Q13356 520 aa21.65■■□□□ 1.06
LSM5-204ENST00000409909 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
LSM5-204ENST00000409909 MAST2Q6P0Q8 1798 aa21.64■■□□□ 1.06
LSM5-204ENST00000409909 CCDC85CA6NKD9 419 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 FKTNO75072 461 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 PPATQ06203 517 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 NOL9Q5SY16 702 aaKnown RBP21.64■■□□□ 1.05
LSM5-204ENST00000409909 TEX11Q8IYF3 940 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 FAM43AQ8N2R8 423 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
LSM5-204ENST00000409909 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
LSM5-204ENST00000409909 RAB11FIP3O75154 756 aa21.63■■□□□ 1.05
LSM5-204ENST00000409909 CETPP11597 493 aa21.63■■□□□ 1.05
LSM5-204ENST00000409909 PPP4CP60510 307 aa21.63■■□□□ 1.05
LSM5-204ENST00000409909 CLASRPQ8N2M8 674 aaKnown RBP21.63■■□□□ 1.05
LSM5-204ENST00000409909 HTTP42858 3142 aa21.62■■□□□ 1.05
LSM5-204ENST00000409909 SNAPC2Q13487 334 aa21.62■■□□□ 1.05
LSM5-204ENST00000409909 OSBPL5Q9H0X9 879 aaPredicted RBP21.62■■□□□ 1.05
LSM5-204ENST00000409909 IGSF3O75054 1194 aa21.61■■□□□ 1.05
LSM5-204ENST00000409909 IDH1O75874 414 aaKnown RBP21.61■■□□□ 1.05
LSM5-204ENST00000409909 BAG3O95817 575 aa21.61■■□□□ 1.05
LSM5-204ENST00000409909 NOL10Q9BSC4 688 aaKnown RBP21.61■■□□□ 1.05
LSM5-204ENST00000409909 BCL11AQ9H165 835 aa21.61■■□□□ 1.05
LSM5-204ENST00000409909 KCNH4Q9UQ05 1017 aa21.61■■□□□ 1.05
LSM5-204ENST00000409909 FAM196BA6NMK8 535 aa21.6■■□□□ 1.05
LSM5-204ENST00000409909 BTBD19C9JJ37 291 aa21.6■■□□□ 1.05
LSM5-204ENST00000409909 TBC1D12O60347 775 aa21.6■■□□□ 1.05
LSM5-204ENST00000409909 CYP7A1P22680 504 aa21.6■■□□□ 1.05
LSM5-204ENST00000409909 SCYL3Q8IZE3 742 aa21.6■■□□□ 1.05
LSM5-204ENST00000409909 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
LSM5-204ENST00000409909 COL2A1P02458 1487 aaPredicted RBP21.59■■□□□ 1.05
LSM5-204ENST00000409909 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
LSM5-204ENST00000409909 PLCG2P16885 1265 aa21.59■■□□□ 1.05
LSM5-204ENST00000409909 DYNLL1P63167 89 aaKnown RBP21.59■■□□□ 1.05
LSM5-204ENST00000409909 MOGSQ13724 837 aa21.59■■□□□ 1.05
LSM5-204ENST00000409909 TAF1CQ15572 869 aaPredicted RBP21.59■■□□□ 1.05
LSM5-204ENST00000409909 CDK5RAP2Q96SN8 1893 aa21.59■■□□□ 1.05
LSM5-204ENST00000409909 CTNND1O60716 968 aaKnown RBP21.58■■□□□ 1.05
LSM5-204ENST00000409909 PTPRAP18433 802 aa21.58■■□□□ 1.05
LSM5-204ENST00000409909 CAP1Q01518 475 aa21.58■■□□□ 1.05
LSM5-204ENST00000409909 PKN2Q16513 984 aaKnown RBP21.58■■□□□ 1.05
LSM5-204ENST00000409909 MAPKAPK5Q8IW41 473 aa21.58■■□□□ 1.05
LSM5-204ENST00000409909 MAGEB6Q8N7X4 407 aa21.58■■□□□ 1.05
LSM5-204ENST00000409909 TGFBRAP1Q8WUH2 860 aa21.58■■□□□ 1.05
LSM5-204ENST00000409909 MIGA1Q8NAN2 632 aa21.57■■□□□ 1.04
LSM5-204ENST00000409909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.57■■□□□ 1.04
LSM5-204ENST00000409909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.57■■□□□ 1.04
LSM5-204ENST00000409909 ZFYVE28Q9HCC9 887 aa21.57■■□□□ 1.04
LSM5-204ENST00000409909 PICK1Q9NRD5 415 aa21.57■■□□□ 1.04
LSM5-204ENST00000409909 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.57■■□□□ 1.04
LSM5-204ENST00000409909 ZHX2Q9Y6X8 837 aa21.57■■□□□ 1.04
LSM5-204ENST00000409909 FLT1P17948 1338 aa21.56■■□□□ 1.04
LSM5-204ENST00000409909 CENPFP49454 3210 aa21.56■■□□□ 1.04
LSM5-204ENST00000409909 MAP3K12Q12852 859 aa21.56■■□□□ 1.04
LSM5-204ENST00000409909 RRP1BQ14684 758 aaKnown RBP21.56■■□□□ 1.04
LSM5-204ENST00000409909 ZCCHC17Q9NP64 241 aaKnown RBP21.56■■□□□ 1.04
LSM5-204ENST00000409909 HPS5Q9UPZ3 1129 aa21.56■■□□□ 1.04
LSM5-204ENST00000409909 FOCADQ5VW36 1801 aa21.56■■□□□ 1.04
LSM5-204ENST00000409909 CXCL11O14625 94 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 SMARCA5O60264 1052 aaPredicted RBP21.55■■□□□ 1.04
LSM5-204ENST00000409909 RRP1P56182 461 aaKnown RBP21.55■■□□□ 1.04
LSM5-204ENST00000409909 SP3Q02447 781 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 CD99L2Q8TCZ2 262 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 LRRCC1Q9C099 1032 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 AFG3L2Q9Y4W6 797 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 DOCK1Q14185 1865 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 SIPA1L1O43166 1804 aa21.55■■□□□ 1.04
LSM5-204ENST00000409909 GOLIM4O00461 696 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms