RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
GYPC-203ENST00000409836 MKRN1Q9UHC7 482 aaKnown RBP16.97■□□□□ 0.31
GYPC-203ENST00000409836 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
GYPC-203ENST00000409836 FLT1P17948 1338 aa16.96■□□□□ 0.31
GYPC-203ENST00000409836 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.31
GYPC-203ENST00000409836 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
GYPC-203ENST00000409836 RASAL3Q86YV0 1011 aa16.96■□□□□ 0.31
GYPC-203ENST00000409836 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
GYPC-203ENST00000409836 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
GYPC-203ENST00000409836 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
GYPC-203ENST00000409836 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.312e-6■■■□□ 17.3
GYPC-203ENST00000409836 ZBTB47Q9UFB7 747 aaPredicted RBP16.96■□□□□ 0.31
GYPC-203ENST00000409836 PTPRFP10586 1907 aa16.96■□□□□ 0.3
GYPC-203ENST00000409836 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.3
GYPC-203ENST00000409836 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.3
GYPC-203ENST00000409836 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
GYPC-203ENST00000409836 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
GYPC-203ENST00000409836 MAP2K2P36507 400 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
GYPC-203ENST00000409836 NOGQ13253 232 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 DCAF15Q66K64 600 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 ZSCAN25Q6NSZ9 544 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 METTL16Q86W50 562 aaKnown RBP16.95■□□□□ 0.3
GYPC-203ENST00000409836 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 ZNF112Q9UJU3 913 aa16.95■□□□□ 0.3
GYPC-203ENST00000409836 TBC1D12O60347 775 aa16.94■□□□□ 0.3
GYPC-203ENST00000409836 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
GYPC-203ENST00000409836 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
GYPC-203ENST00000409836 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
GYPC-203ENST00000409836 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
GYPC-203ENST00000409836 ANKRD13AQ8IZ07 590 aa16.94■□□□□ 0.3
GYPC-203ENST00000409836 DHX36Q9H2U1 1008 aaKnown RBP16.94■□□□□ 0.3
GYPC-203ENST00000409836 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
GYPC-203ENST00000409836 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
GYPC-203ENST00000409836 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
GYPC-203ENST00000409836 TCP10Q12799 353 aa16.93■□□□□ 0.3
GYPC-203ENST00000409836 NOL9Q5SY16 702 aaKnown RBP16.93■□□□□ 0.3
GYPC-203ENST00000409836 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
GYPC-203ENST00000409836 CSRNP1Q96S65 589 aa16.93■□□□□ 0.3
GYPC-203ENST00000409836 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
GYPC-203ENST00000409836 UBE2Q2LH0YL09 131 aa16.92■□□□□ 0.3
GYPC-203ENST00000409836 ZBTB48P10074 688 aaPredicted RBP16.92■□□□□ 0.3
GYPC-203ENST00000409836 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
GYPC-203ENST00000409836 LRRFIP1Q32MZ4 808 aaKnown RBP16.92■□□□□ 0.3
GYPC-203ENST00000409836 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
GYPC-203ENST00000409836 ZNF341Q9BYN7 854 aa16.92■□□□□ 0.3
GYPC-203ENST00000409836 MAGEB6P1A0A0J9YX57 407 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 PHF20L1A8MW92 1017 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
GYPC-203ENST00000409836 VGLL4Q14135 290 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
GYPC-203ENST00000409836 APPBP2Q92624 585 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 EHD4Q9H223 541 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 HERC5Q9UII4 1024 aaKnown RBP16.91■□□□□ 0.3
GYPC-203ENST00000409836 MYH8P13535 1937 aa16.91■□□□□ 0.3
GYPC-203ENST00000409836 PICALMQ13492 652 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 TTLL12Q14166 644 aaPredicted RBP16.9■□□□□ 0.3
GYPC-203ENST00000409836 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 LCORLQ8N3X6 602 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 CLMNQ96JQ2 1002 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 WRNIP1Q96S55 665 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
GYPC-203ENST00000409836 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 SNCAIPQ9Y6H5 919 aa16.9■□□□□ 0.3
GYPC-203ENST00000409836 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.29
GYPC-203ENST00000409836 MBD4O95243 580 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 PDE4AP27815 886 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 SPRYD7Q5W111 196 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.29
GYPC-203ENST00000409836 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 LOC285556D6RIA3 1793 aa16.89■□□□□ 0.29
GYPC-203ENST00000409836 CHGBP05060 677 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 MAP2K1Q02750 393 aaPredicted RBP16.88■□□□□ 0.29
GYPC-203ENST00000409836 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 OSBP2Q969R2 916 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 PUS7LQ9H0K6 701 aaKnown RBP16.88■□□□□ 0.29
GYPC-203ENST00000409836 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 WBP1LQ9NX94 342 aa16.88■□□□□ 0.29
GYPC-203ENST00000409836 GREB1LQ9C091 1923 aaPredicted RBP16.88■□□□□ 0.29
GYPC-203ENST00000409836 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 PRKG1Q13976 671 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 SLFNL1Q499Z3 407 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 ZSCAN29Q8IWY8 852 aaPredicted RBP16.87■□□□□ 0.29
GYPC-203ENST00000409836 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 DCP1AQ9NPI6 582 aaPredicted RBP16.87■□□□□ 0.29
GYPC-203ENST00000409836 CSADQ9Y600 493 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
GYPC-203ENST00000409836 CA12O43570 354 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms