RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 UAP1Q16222 522 aaPredicted RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 GEN1Q17RS7 908 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CDH24Q86UP0 819 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 TRIM22Q8IYM9 498 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 VPS52Q8N1B4 723 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 ARHGEF2Q92974 986 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 CIDECQ96AQ7 238 aaPredicted RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SPATA32Q96LK8 384 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 PHAXQ9H814 394 aaKnown RBP4.58□□□□□ -1.68
RGPD1-202ENST00000409776 HOMER3Q9NSC5 361 aa4.58□□□□□ -1.68
RGPD1-202ENST00000409776 SFI1A8K8P3 1242 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SMAPO00193 183 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 BIRC5O15392 142 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 POLR2DO15514 142 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 MYO1BO43795 1136 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 IFIT2P09913 472 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PTPN6P29350 595 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ALDH3A1P30838 453 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 AKR1D1P51857 326 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 GUCY1B3Q02153 619 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KCNA1Q09470 495 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 MKRN4PQ13434 485 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ARHGAP29Q52LW3 1261 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PDXDC1Q6P996 788 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SESTD1Q86VW0 696 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CCDC13Q8IYE1 715 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 TRIM36Q9NQ86 728 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 H7C0S8 307 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 MMEP08473 750 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 EEF2P13639 858 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 LCP1P13796 627 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SDE2Q6IQ49 451 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 NFXL1Q6ZNB6 911 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PDZD8Q8NEN9 1154 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 IFT81Q8WYA0 676 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 GCC1Q96CN9 775 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RRP36Q96EU6 259 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CGNL1Q0VF96 1302 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KRT2P35908 639 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 AMPHP49418 695 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PRKG2Q13237 762 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 NCAPH2Q6IBW4 605 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KRT80Q6KB66 452 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KIF18AQ8NI77 898 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SNRNP27Q8WVK2 155 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 GEMIN8Q9NWZ8 242 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 MTRF1LQ9UGC7 380 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 MAGED2Q9UNF1 606 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 NRG3P56975 720 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CKAP4Q07065 602 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RAD51AP2Q09MP3 1159 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PTPN14Q15678 1187 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 COLGALT2Q8IYK4 626 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 AFAP1L2Q8N4X5 818 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 NGEFQ8N5V2 710 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RNASE11Q8TAA1 199 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 TBC1D22AQ8WUA7 517 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 TUBGCP3Q96CW5 907 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SLC24A3Q9HC58 644 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 GNB5O14775 395 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ATP6V1G1O75348 118 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ABL2P42684 1182 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RECQLP46063 649 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RCN2Q14257 317 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PPP1R42Q7Z4L9 355 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SDF4Q9BRK5 362 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 GIT1Q9Y2X7 761 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SCAMP1O15126 338 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CASC3O15234 703 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ASS1P00966 412 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KRT14P02533 472 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KRT1P04264 644 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 SLC4A3P48751 1232 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RRP1P56182 461 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 PSMC1P62191 440 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KIF23Q02241 960 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 IFRD2Q12894 506 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CCDC85BQ15834 202 aaPredicted RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 NDUFA5Q16718 116 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 CCDC142Q17RM4 750 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 ATP13A5Q4VNC0 1218 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RFT1Q96AA3 541 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 KIFC2Q96AC6 838 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 RUNDC1Q96C34 613 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 TRAIPQ9BWF2 469 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 BAIAP2L1Q9UHR4 511 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 FAM50BQ9Y247 325 aa4.57□□□□□ -1.68
RGPD1-202ENST00000409776 BZW2Q9Y6E2 419 aaKnown RBP4.57□□□□□ -1.68
RGPD1-202ENST00000409776 FAM25AB3EWG3 89 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 FAM25CB3EWG5 89 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 FAM25GB3EWG6 89 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 MAP3K13O43283 966 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 XPOTO43592 962 aaKnown RBP4.56□□□□□ -1.68
RGPD1-202ENST00000409776 ECEL1O95672 775 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 TRPC1P48995 793 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 SNX1Q13596 522 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 TBC1D1Q86TI0 1168 aaPredicted RBP4.56□□□□□ -1.68
RGPD1-202ENST00000409776 CTAGE3PQ8IX95 158 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 RGS22Q8NE09 1264 aa4.56□□□□□ -1.68
RGPD1-202ENST00000409776 SDCCAG3Q96C92 435 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms