RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GPR75-ASB3A0A0A6YYF3 556 aa18.14■□□□□ 0.49
CBX3-203ENST00000409747 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
CBX3-203ENST00000409747 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
CBX3-203ENST00000409747 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
CBX3-203ENST00000409747 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
CBX3-203ENST00000409747 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
CBX3-203ENST00000409747 CENPFP49454 3210 aa18.13■□□□□ 0.49
CBX3-203ENST00000409747 MAST2Q6P0Q8 1798 aa18.13■□□□□ 0.49
CBX3-203ENST00000409747 PICALMQ13492 652 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 CCDC158Q5M9N0 1113 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 NSUN4Q96CB9 384 aaKnown RBP18.12■□□□□ 0.49
CBX3-203ENST00000409747 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 CXCL11O14625 94 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 SURF6O75683 361 aaKnown RBP18.12■□□□□ 0.49
CBX3-203ENST00000409747 GNRH1P01148 92 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 MCAMP43121 646 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 TTC39AQ5SRH9 613 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 PI16Q6UXB8 463 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 ARMC5Q96C12 935 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 DDX4Q9NQI0 724 aaKnown RBP18.12■□□□□ 0.49
CBX3-203ENST00000409747 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
CBX3-203ENST00000409747 RBBP6Q7Z6E9 1792 aaKnown RBP18.12■□□□□ 0.49
CBX3-203ENST00000409747 COL2A1P02458 1487 aaPredicted RBP18.11■□□□□ 0.49
CBX3-203ENST00000409747 DOCK1Q14185 1865 aa18.11■□□□□ 0.49
CBX3-203ENST00000409747 PHF20L1A8MW92 1017 aa18.11■□□□□ 0.49
CBX3-203ENST00000409747 PDHXO00330 501 aa18.11■□□□□ 0.49
CBX3-203ENST00000409747 RHBDL3P58872 404 aa18.11■□□□□ 0.49
CBX3-203ENST00000409747 MAP3K10Q02779 954 aa18.11■□□□□ 0.49
CBX3-203ENST00000409747 NOL10Q9BSC4 688 aaKnown RBP18.11■□□□□ 0.49
CBX3-203ENST00000409747 DDTLA6NHG4 134 aaPredicted RBP18.1■□□□□ 0.49
CBX3-203ENST00000409747 IGSF3O75054 1194 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 LACTBP83111 547 aaPredicted RBP18.1■□□□□ 0.49
CBX3-203ENST00000409747 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 NBPF11Q86T75 865 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 ZNF384Q8TF68 577 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
CBX3-203ENST00000409747 ZBTB7BO15156 539 aaPredicted RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 CTNND1O60716 968 aaKnown RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 PDE4DIPQ5VU43 2346 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 PARK7Q99497 189 aaKnown RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 TBC1D12O60347 775 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 PTPRAP18433 802 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 PRMT2P55345 433 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 FASTKD5Q7L8L6 764 aaKnown RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 ZNF512BQ96KM6 892 aaPredicted RBP18.09■□□□□ 0.49
CBX3-203ENST00000409747 ZHX2Q9Y6X8 837 aa18.09■□□□□ 0.49
CBX3-203ENST00000409747 BAG3O95817 575 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 MS4A1P11836 297 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 RLBP1P12271 317 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 CAP1Q01518 475 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 C17orf99Q6UX52 265 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.48
CBX3-203ENST00000409747 A0A0G2JLL6 359 aaPredicted RBP18.07■□□□□ 0.48
CBX3-203ENST00000409747 PLCG2P16885 1265 aa18.07■□□□□ 0.48
CBX3-203ENST00000409747 MOGSQ13724 837 aa18.07■□□□□ 0.48
CBX3-203ENST00000409747 NAA16Q6N069 864 aaPredicted RBP18.07■□□□□ 0.48
CBX3-203ENST00000409747 PRRT2Q7Z6L0 340 aaPredicted RBP18.07■□□□□ 0.48
CBX3-203ENST00000409747 TEX11Q8IYF3 940 aa18.07■□□□□ 0.48
CBX3-203ENST00000409747 OSBPL5Q9H0X9 879 aaPredicted RBP18.07■□□□□ 0.48
CBX3-203ENST00000409747 PTCH2Q9Y6C5 1203 aa18.07■□□□□ 0.48
CBX3-203ENST00000409747 PRPF38BQ5VTL8 546 aaKnown RBP18.06■□□□□ 0.48
CBX3-203ENST00000409747 ZNF333Q96JL9 665 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 TMEM106CQ9BVX2 250 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.06■□□□□ 0.48
CBX3-203ENST00000409747 CPA4Q9UI42 421 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 AFG3L2Q9Y4W6 797 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 ADGRA2Q96PE1 1338 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 HOXD10P28358 340 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 SLC45A1Q9Y2W3 748 aa18.06■□□□□ 0.48
CBX3-203ENST00000409747 GPAT2Q6NUI2 795 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 ARHGAP39Q9C0H5 1083 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 HERC5Q9UII4 1024 aaKnown RBP18.05■□□□□ 0.48
CBX3-203ENST00000409747 ZSWIM8A7E2V4 1837 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 PTPRFP10586 1907 aa18.05■□□□□ 0.48
CBX3-203ENST00000409747 PHIPQ8WWQ0 1821 aa18.04■□□□□ 0.48
CBX3-203ENST00000409747 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
CBX3-203ENST00000409747 GADL1Q6ZQY3 521 aa18.04■□□□□ 0.48
CBX3-203ENST00000409747 DHX36Q9H2U1 1008 aaKnown RBP18.04■□□□□ 0.48
CBX3-203ENST00000409747 DBNLQ9UJU6 430 aaKnown RBP18.04■□□□□ 0.48
CBX3-203ENST00000409747 CYP2E1P05181 493 aaPredicted RBP18.03■□□□□ 0.48
CBX3-203ENST00000409747 PSMC4P43686 418 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 SH3RF3Q8TEJ3 882 aaPredicted RBP18.03■□□□□ 0.48
CBX3-203ENST00000409747 AATFQ9NY61 560 aaKnown RBP eCLIP18.03■□□□□ 0.48
CBX3-203ENST00000409747 BRCA2P51587 3418 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 PPP4CP60510 307 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 HSP90AB4PQ58FF6 505 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
CBX3-203ENST00000409747 PI4KBQ9UBF8 816 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms