RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 HTATIP2Q9BUP3 242 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 LRRC7Q96NW7 1537 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 NAP1L1P55209 391 aaKnown RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 MICU3Q86XE3 530 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 C8orf76Q96K31 380 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 VPS33BQ9H267 617 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 KDRP35968 1356 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 IBTKQ9P2D0 1353 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 ADAMTS13Q76LX8 1427 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 GNAT1P11488 350 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 GMPSP49915 693 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 GTF2A2P52657 109 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 SUSD4Q5VX71 490 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 PA2G4Q9UQ80 394 aaKnown RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 ATP6V0A2Q9Y487 856 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 CDC42BPAQ5VT25 1732 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 USP17L5A8MUK1 530 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-203ENST00000409598 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-203ENST00000409598 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 ANKRD13AQ8IZ07 590 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 MANSC4A6NHS7 340 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-203ENST00000409598 TRIM27P14373 513 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 CETN2P41208 172 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 APLP1P51693 650 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 RBM10P98175 930 aaKnown RBP8.57□□□□□ -1.04
SH3D19-203ENST00000409598 NBPF15Q8N660 670 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 AGBL3Q8NEM8 1001 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 IFT74Q96LB3 600 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 MEIS3Q99687 375 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 STK25O00506 426 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 PHACTR2O75167 634 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 KCNJ6P48051 423 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 TNNI3KQ59H18 835 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 PRR5LQ6MZQ0 368 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 FPGT-TNNI3KV9GXZ4 949 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 USP19O94966 1318 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 STX6O43752 255 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 UBA7P41226 1012 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 FAM160B1Q5W0V3 765 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 LDHDQ86WU2 507 aa8.57□□□□□ -1.04
SH3D19-203ENST00000409598 ZNF215Q9UL58 517 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-203ENST00000409598 CA12O43570 354 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SMARCA5O60264 1052 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 VAMP4O75379 141 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 CASTP20810 708 aaKnown RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 USP17L2Q6R6M4 530 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 USP50Q70EL3 339 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TTC16Q8NEE8 873 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 APPBP2Q92624 585 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 CLIP2Q9UDT6 1046 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SUGT1Q9Y2Z0 365 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 ZHX2Q9Y6X8 837 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TRAK2O60296 914 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 ACTN1P12814 892 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 NOGQ13253 232 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 LARP1BQ659C4 914 aaKnown RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 JPH2Q9BR39 696 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 GREM2Q9H772 168 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 KANSL2Q9H9L4 492 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 GGA3Q9NZ52 723 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 USP42Q9H9J4 1324 aaKnown RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SASH1O94885 1247 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 PDE8BO95263 885 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 ZNF771Q7L3S4 317 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 CRKP46108 304 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TIMM10P62072 90 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TRIM47Q96LD4 638 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 NEK1Q96PY6 1258 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SH2B1Q9NRF2 756 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-203ENST00000409598 SPATA31D1Q6ZQQ2 1576 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 CCL15-CCL14A0A0B4J2E2 113 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 ME1P48163 572 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 SLC8A3P57103 927 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 CCL15Q16663 113 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 FAM160B2Q86V87 743 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 LINC00116Q8NCU8 138 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 ZNHIT6Q9NWK9 470 aaKnown RBP8.55□□□□□ -1.04
SH3D19-203ENST00000409598 SRGAP2BP0DMP2 458 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 INHBEP58166 350 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 STRIP1Q5VSL9 837 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 LRRC45Q96CN5 670 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 CDHR1Q96JP9 859 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 SLC26A6Q9BXS9 759 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 ARMT1Q9H993 441 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms