RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 GPR108Q9NPR9 543 aa27.71■■■□□ 2.03
KDELR3-202ENST00000409006 DDTLA6NHG4 134 aaPredicted RBP27.7■■■□□ 2.02
KDELR3-202ENST00000409006 BTBD19C9JJ37 291 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 CETPP11597 493 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 OS9Q13438 667 aaPredicted RBP27.7■■■□□ 2.02
KDELR3-202ENST00000409006 SNAPC2Q13487 334 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 PICALMQ13492 652 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 ERO1AQ96HE7 468 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 NOP58Q9Y2X3 529 aaKnown RBP27.7■■■□□ 2.02
KDELR3-202ENST00000409006 CDK5RAP2Q96SN8 1893 aa27.7■■■□□ 2.02
KDELR3-202ENST00000409006 PHF20L1A8MW92 1017 aa27.69■■■□□ 2.02
KDELR3-202ENST00000409006 UQCRFS1P1P0C7P4 283 aa27.69■■■□□ 2.02
KDELR3-202ENST00000409006 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.69■■■□□ 2.02
KDELR3-202ENST00000409006 ZFYVE28Q9HCC9 887 aa27.69■■■□□ 2.02
KDELR3-202ENST00000409006 SNRKQ9NRH2 765 aa27.69■■■□□ 2.02
KDELR3-202ENST00000409006 PHIPQ8WWQ0 1821 aa27.69■■■□□ 2.02
KDELR3-202ENST00000409006 MAST2Q6P0Q8 1798 aa27.68■■■□□ 2.02
KDELR3-202ENST00000409006 NOL9Q5SY16 702 aaKnown RBP27.68■■■□□ 2.02
KDELR3-202ENST00000409006 RAI14Q9P0K7 980 aa27.68■■■□□ 2.02
KDELR3-202ENST00000409006 DOCK1Q14185 1865 aa27.68■■■□□ 2.02
KDELR3-202ENST00000409006 PTPRFP10586 1907 aa27.67■■■□□ 2.02
KDELR3-202ENST00000409006 CEP85Q6P2H3 762 aa27.67■■■□□ 2.02
KDELR3-202ENST00000409006 ZSCAN29Q8IWY8 852 aaPredicted RBP27.67■■■□□ 2.02
KDELR3-202ENST00000409006 TNRC18O15417 2968 aaPredicted RBP27.66■■■□□ 2.02
KDELR3-202ENST00000409006 MAP3K10Q02779 954 aa27.66■■■□□ 2.02
KDELR3-202ENST00000409006 TTC39AQ5SRH9 613 aa27.66■■■□□ 2.02
KDELR3-202ENST00000409006 KCNH4Q9UQ05 1017 aa27.66■■■□□ 2.02
KDELR3-202ENST00000409006 EFCC1Q9HA90 598 aa27.65■■■□□ 2.02
KDELR3-202ENST00000409006 TLR7Q9NYK1 1049 aaKnown RBP27.65■■■□□ 2.02
KDELR3-202ENST00000409006 LRP2BPQ9P2M1 347 aa27.65■■■□□ 2.02
KDELR3-202ENST00000409006 DBNLQ9UJU6 430 aaKnown RBP27.65■■■□□ 2.02
KDELR3-202ENST00000409006 PTPN22Q9Y2R2 807 aa27.65■■■□□ 2.02
KDELR3-202ENST00000409006 HTTP42858 3142 aa27.64■■■□□ 2.02
KDELR3-202ENST00000409006 LDHCP07864 332 aa27.64■■■□□ 2.02
KDELR3-202ENST00000409006 GSTO1P78417 241 aa27.64■■■□□ 2.02
KDELR3-202ENST00000409006 MOGSQ13724 837 aa27.64■■■□□ 2.02
KDELR3-202ENST00000409006 CCDC158Q5M9N0 1113 aa27.64■■■□□ 2.02
KDELR3-202ENST00000409006 EAF2Q96CJ1 260 aaPredicted RBP27.64■■■□□ 2.02
KDELR3-202ENST00000409006 CCDC8Q9H0W5 538 aaPredicted RBP27.64■■■□□ 2.02
KDELR3-202ENST00000409006 FOCADQ5VW36 1801 aa27.63■■■□□ 2.01
KDELR3-202ENST00000409006 ATAD5Q96QE3 1844 aa27.63■■■□□ 2.01
KDELR3-202ENST00000409006 TLR2O60603 784 aa27.63■■■□□ 2.01
KDELR3-202ENST00000409006 CYP2E1P05181 493 aaPredicted RBP27.63■■■□□ 2.01
KDELR3-202ENST00000409006 ZCCHC17Q9NP64 241 aaKnown RBP27.63■■■□□ 2.01
KDELR3-202ENST00000409006 SIPA1L1O43166 1804 aa27.62■■■□□ 2.01
KDELR3-202ENST00000409006 SCYL3Q8IZE3 742 aa27.62■■■□□ 2.01
KDELR3-202ENST00000409006 NPM3O75607 178 aaKnown RBP27.61■■■□□ 2.01
KDELR3-202ENST00000409006 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.61■■■□□ 2.01
KDELR3-202ENST00000409006 EXOC6BQ9Y2D4 811 aa27.61■■■□□ 2.01
KDELR3-202ENST00000409006 FAM196BA6NMK8 535 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ZAP70P43403 619 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ANKRD23Q86SG2 305 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ADGRA1Q86SQ6 560 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 SH3RF3Q8TEJ3 882 aaPredicted RBP27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ZNF512BQ96KM6 892 aaPredicted RBP27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ARHGAP39Q9C0H5 1083 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 ZHX2Q9Y6X8 837 aa27.6■■■□□ 2.01
KDELR3-202ENST00000409006 PDHXO00330 501 aa27.59■■■□□ 2.01
KDELR3-202ENST00000409006 PTPRAP18433 802 aa27.59■■■□□ 2.01
KDELR3-202ENST00000409006 PIH1D3Q9NQM4 214 aaKnown RBP27.59■■■□□ 2.01
KDELR3-202ENST00000409006 NAA16Q6N069 864 aaPredicted RBP27.58■■■□□ 2.01
KDELR3-202ENST00000409006 GPAT2Q6NUI2 795 aa27.58■■■□□ 2.01
KDELR3-202ENST00000409006 TEX11Q8IYF3 940 aa27.58■■■□□ 2.01
KDELR3-202ENST00000409006 OSBPL5Q9H0X9 879 aaPredicted RBP27.58■■■□□ 2.01
KDELR3-202ENST00000409006 PICK1Q9NRD5 415 aa27.58■■■□□ 2.01
KDELR3-202ENST00000409006 AATFQ9NY61 560 aaKnown RBP eCLIP27.58■■■□□ 2.01
KDELR3-202ENST00000409006 RBBP6Q7Z6E9 1792 aaKnown RBP27.58■■■□□ 2
KDELR3-202ENST00000409006 CENPFP49454 3210 aa27.58■■■□□ 2
KDELR3-202ENST00000409006 CXCL11O14625 94 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 MAP4K4O95819 1239 aaPredicted RBP27.57■■■□□ 2
KDELR3-202ENST00000409006 C17orf99Q6UX52 265 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 CCDC84Q86UT8 332 aaPredicted RBP27.57■■■□□ 2
KDELR3-202ENST00000409006 CPA4Q9UI42 421 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 COG6Q9Y2V7 657 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 AFG3L2Q9Y4W6 797 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 NDUFB9Q9Y6M9 179 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 ADGRA2Q96PE1 1338 aa27.57■■■□□ 2
KDELR3-202ENST00000409006 COL2A1P02458 1487 aaPredicted RBP27.57■■■□□ 2
KDELR3-202ENST00000409006 PDE4DIPQ5VU43 2346 aa27.56■■■□□ 2
KDELR3-202ENST00000409006 MGAMO43451 1857 aa27.56■■■□□ 2
KDELR3-202ENST00000409006 TBC1D12O60347 775 aa27.56■■■□□ 2
KDELR3-202ENST00000409006 CTNND1O60716 968 aaKnown RBP27.56■■■□□ 2
KDELR3-202ENST00000409006 ECM2O94769 699 aaPredicted RBP27.56■■■□□ 2
KDELR3-202ENST00000409006 CTGFP29279 349 aa27.55■■■□□ 2
KDELR3-202ENST00000409006 LACTBP83111 547 aaPredicted RBP27.55■■■□□ 2
KDELR3-202ENST00000409006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.55■■■□□ 2
KDELR3-202ENST00000409006 PTCH2Q9Y6C5 1203 aa27.55■■■□□ 2
KDELR3-202ENST00000409006 A0A0G2JLL6 359 aaPredicted RBP27.54■■■□□ 2
KDELR3-202ENST00000409006 PPP4CP60510 307 aa27.54■■■□□ 2
KDELR3-202ENST00000409006 KIAA0100Q14667 2235 aaKnown RBP27.54■■■□□ 2
KDELR3-202ENST00000409006 RRP1BQ14684 758 aaKnown RBP27.54■■■□□ 2
KDELR3-202ENST00000409006 PRRT2Q7Z6L0 340 aaPredicted RBP27.54■■■□□ 2
KDELR3-202ENST00000409006 ARMC5Q96C12 935 aa27.54■■■□□ 2
KDELR3-202ENST00000409006 POTEFA5A3E0 1075 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 MS4A1P11836 297 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 AACSQ86V21 672 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 SIRT2Q8IXJ6 389 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 IL1RAPL2Q9NP60 686 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 MYH1P12882 1939 aa27.53■■■□□ 2
KDELR3-202ENST00000409006 CYP2C8P10632 490 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms