RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 DDTLA6NHG4 134 aaPredicted RBP20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 HMMRO75330 724 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 ENTPD3O75355 529 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 ZSCAN29Q8IWY8 852 aaPredicted RBP20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 ZNF296Q8WUU4 475 aaPredicted RBP20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 MS4A4AQ96JQ5 239 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 CHMP4BQ9H444 224 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 PIH1D3Q9NQM4 214 aaKnown RBP20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 RFX7Q2KHR2 1363 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
CSNK1D-205ENST00000403276 CDK5RAP2Q96SN8 1893 aa20.56■□□□□ 0.88
CSNK1D-205ENST00000403276 GPR25O00155 361 aa20.56■□□□□ 0.88
CSNK1D-205ENST00000403276 NAA16Q6N069 864 aaPredicted RBP20.56■□□□□ 0.88
CSNK1D-205ENST00000403276 SPDYE5A6NIY4 337 aa20.55■□□□□ 0.88
CSNK1D-205ENST00000403276 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
CSNK1D-205ENST00000403276 ERO1BQ86YB8 467 aa20.55■□□□□ 0.88
CSNK1D-205ENST00000403276 ZNF112Q9UJU3 913 aa20.55■□□□□ 0.88
CSNK1D-205ENST00000403276 CCL15-CCL14A0A0B4J2E2 113 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 TESPA1A2RU30 521 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 CCL15Q16663 113 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 ADGRA1Q86SQ6 560 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 SH3RF3Q8TEJ3 882 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 BRI3BPQ8WY22 251 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 KIF1BPQ96EK5 621 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 CFHR5Q9BXR6 569 aa20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 AATFQ9NY61 560 aaKnown RBP eCLIP20.54■□□□□ 0.88
CSNK1D-205ENST00000403276 IRF6O14896 467 aa20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 GTF2A2P52657 109 aa20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 TEX11Q8IYF3 940 aa20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
CSNK1D-205ENST00000403276 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
CSNK1D-205ENST00000403276 OTUD7BQ6GQQ9 843 aa20.52■□□□□ 0.88
CSNK1D-205ENST00000403276 PHF20L1A8MW92 1017 aa20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 FKTNO75072 461 aa20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 RAB11FIP3O75154 756 aa20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 IDH1O75874 414 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 CRHR2Q13324 411 aa20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 PPIL2Q13356 520 aa20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 CTU1Q7Z7A3 348 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-205ENST00000403276 FOCADQ5VW36 1801 aa20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 BAG3O95817 575 aa20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 MAP4K4O95819 1239 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 IFIT2P09913 472 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 CYP7A1P22680 504 aa20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 NOM1Q5C9Z4 860 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 FAM43AQ8N2R8 423 aa20.5■□□□□ 0.87
CSNK1D-205ENST00000403276 FAM196BA6NMK8 535 aa20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 NPM3O75607 178 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 DYNLL1P63167 89 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 MAP3K10Q02779 954 aa20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 PPATQ06203 517 aa20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 SNAPC2Q13487 334 aa20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 TGFBRAP1Q8WUH2 860 aa20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 OSBPL5Q9H0X9 879 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-205ENST00000403276 DOCK1Q14185 1865 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 SMARCA5O60264 1052 aaPredicted RBP20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 CETPP11597 493 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 PPP4CP60510 307 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 MAPKAPK5Q8IW41 473 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 MAGEB6Q8N7X4 407 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 PHIPQ8WWQ0 1821 aa20.48■□□□□ 0.87
CSNK1D-205ENST00000403276 MYH1P12882 1939 aa20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 BTBD19C9JJ37 291 aa20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 TAF1CQ15572 869 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.47■□□□□ 0.875e-7■■■■■ 29.1
CSNK1D-205ENST00000403276 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 ATAD5Q96QE3 1844 aa20.47■□□□□ 0.87
CSNK1D-205ENST00000403276 PLCG2P16885 1265 aa20.46■□□□□ 0.87
CSNK1D-205ENST00000403276 RRP1P56182 461 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-205ENST00000403276 SCYL3Q8IZE3 742 aa20.46■□□□□ 0.87
CSNK1D-205ENST00000403276 DNAJC2Q99543 621 aaKnown RBP20.46■□□□□ 0.87
CSNK1D-205ENST00000403276 PTPRFP10586 1907 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 TBC1D12O60347 775 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 PTPRAP18433 802 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 MAP3K12Q12852 859 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 EDC3Q96F86 508 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 LRRCC1Q9C099 1032 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 PICK1Q9NRD5 415 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 KCNH4Q9UQ05 1017 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 ZHX2Q9Y6X8 837 aa20.45■□□□□ 0.86
CSNK1D-205ENST00000403276 GOLIM4O00461 696 aa20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 CTNND1O60716 968 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 IGSF3O75054 1194 aa20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 CCDC84Q86UT8 332 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 CD99L2Q8TCZ2 262 aa20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 BOLA2Q9H3K6 86 aa20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 SAP30BPQ9UHR5 308 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 FLT1P17948 1338 aa20.44■□□□□ 0.86
CSNK1D-205ENST00000403276 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-205ENST00000403276 CAP1Q01518 475 aa20.43■□□□□ 0.86
CSNK1D-205ENST00000403276 MOGSQ13724 837 aa20.43■□□□□ 0.86
CSNK1D-205ENST00000403276 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms