RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FLT1P17948 1338 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 IDH1O75874 414 aaKnown RBP9.05□□□□□ -0.96
USP16-204ENST00000399976 C1QTNF8P60827 252 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 STRBPQ96SI9 672 aaKnown RBP9.05□□□□□ -0.96
USP16-204ENST00000399976 DSCC1Q9BVC3 393 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 DEFB129Q9H1M3 183 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 FGRP09769 529 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 GSPT1P15170 499 aaKnown RBP9.05□□□□□ -0.96
USP16-204ENST00000399976 SDSP20132 328 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 ADGRA1Q86SQ6 560 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
USP16-204ENST00000399976 TMEM88BA6NKF7 163 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 APBB1O00213 710 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 IRX6P78412 446 aaPredicted RBP9.04□□□□□ -0.96
USP16-204ENST00000399976 MCMDC2Q4G0Z9 681 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 TTC6Q86TZ1 520 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 TEX11Q8IYF3 940 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 ZNF341Q9BYN7 854 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 TDRD3Q9H7E2 651 aaKnown RBP9.04□□□□□ -0.96
USP16-204ENST00000399976 PATL2C9JE40 543 aaKnown RBP9.04□□□□□ -0.96
USP16-204ENST00000399976 HSPA6P17066 643 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 GABPAQ06546 454 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 ARMC9Q7Z3E5 817 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 CCDC171Q6TFL3 1326 aa9.04□□□□□ -0.96
USP16-204ENST00000399976 RASA3Q14644 834 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 EAPPQ56P03 285 aaPredicted RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 TATDN1Q6P1N9 297 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 DDRGK1Q96HY6 314 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 MTA3Q9BTC8 594 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 ZBTB48P10074 688 aaPredicted RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 RGS3P49796 1198 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 RBM5P52756 815 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP16-204ENST00000399976 AMOTL1Q8IY63 956 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 IL17RAQ96F46 866 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 NACAP1Q9BZK3 213 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 HLA-DOAP06340 250 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 C2orf69Q8N8R5 385 aa9.03□□□□□ -0.96
USP16-204ENST00000399976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP16-204ENST00000399976 GBA2Q9HCG7 927 aaPredicted RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 DCP1AQ9NPI6 582 aaPredicted RBP9.03□□□□□ -0.96
USP16-204ENST00000399976 F8W031 263 aaPredicted RBP9.02□□□□□ -0.97
USP16-204ENST00000399976 GPAA1O43292 621 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
USP16-204ENST00000399976 CTNND1O60716 968 aaKnown RBP9.02□□□□□ -0.97
USP16-204ENST00000399976 OSBP2Q969R2 916 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
USP16-204ENST00000399976 CHMLP26374 656 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 NOM1Q5C9Z4 860 aaKnown RBP9.02□□□□□ -0.97
USP16-204ENST00000399976 C12orf60Q5U649 245 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 CASC1Q6TDU7 716 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 USP48Q86UV5 1035 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 ANKRD13AQ8IZ07 590 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 KLRG1Q96E93 195 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 CCDC17Q96LX7 622 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
USP16-204ENST00000399976 CLEC11AQ9Y240 323 aa9.02□□□□□ -0.97
USP16-204ENST00000399976 GSG1L2A8MUP6 293 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 CDC45O75419 566 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 MBD4O95243 580 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 POTEIP0CG38 1075 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 ECE1P42892 770 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 C16orf86Q6ZW13 317 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 LCORLQ8N3X6 602 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 GLIS2Q9BZE0 524 aaPredicted RBP9.01□□□□□ -0.97
USP16-204ENST00000399976 PUS7LQ9H0K6 701 aaKnown RBP9.01□□□□□ -0.97
USP16-204ENST00000399976 DDX4Q9NQI0 724 aaKnown RBP9.01□□□□□ -0.97
USP16-204ENST00000399976 SLC45A1Q9Y2W3 748 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 ZNF236Q9UL36 1845 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 PHF20L1A8MW92 1017 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 SGSM2O43147 1006 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 NOVP48745 357 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 INHBEP58166 350 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 CST9Q5W186 159 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 MAP1SQ66K74 1059 aaPredicted RBP9.01□□□□□ -0.97
USP16-204ENST00000399976 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 DIAPH3Q9NSV4 1193 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 JAG2Q9Y219 1238 aa9.01□□□□□ -0.97
USP16-204ENST00000399976 ADM5C9JUS6 153 aa9□□□□□ -0.97
USP16-204ENST00000399976 ORC4O43929 436 aa9□□□□□ -0.97
USP16-204ENST00000399976 USP2O75604 605 aaPredicted RBP9□□□□□ -0.97
USP16-204ENST00000399976 SLC10A3P09131 477 aa9□□□□□ -0.97
USP16-204ENST00000399976 MAP2K2P36507 400 aa9□□□□□ -0.97
USP16-204ENST00000399976 SAPCD2Q86UD0 394 aa9□□□□□ -0.97
USP16-204ENST00000399976 KCNB2Q92953 911 aa9□□□□□ -0.97
USP16-204ENST00000399976 ASTN2O75129 1339 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms