RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 UBXN6Q9BZV1 441 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 COPRSQ9NQ92 184 aa19.53■□□□□ 0.72
PTPRA-205ENST00000399903 ERLIN1O75477 346 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 MAGEA9P43362 315 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 ZNF827Q17R98 1081 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 HSP90AB3PQ58FF7 597 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 HINFPQ9BQA5 517 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 CCDC151A5D8V7 595 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 NUTM2BA6NNL0 878 aaPredicted RBP19.52■□□□□ 0.72
PTPRA-205ENST00000399903 NUTM2EB1AL46 878 aaPredicted RBP19.52■□□□□ 0.72
PTPRA-205ENST00000399903 NUTM2AQ8IVF1 878 aaPredicted RBP19.52■□□□□ 0.72
PTPRA-205ENST00000399903 VSTM4Q8IW00 320 aa19.52■□□□□ 0.72
PTPRA-205ENST00000399903 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.71
PTPRA-205ENST00000399903 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 IBSPP21815 317 aaPredicted RBP19.51■□□□□ 0.71
PTPRA-205ENST00000399903 AKAP17AQ02040 695 aaKnown RBP19.51■□□□□ 0.71
PTPRA-205ENST00000399903 ACSBG1Q96GR2 724 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 RSRC2Q7L4I2 434 aaKnown RBP19.51■□□□□ 0.71
PTPRA-205ENST00000399903 KCNG4Q8TDN1 519 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 SOWAHDA6NJG2 315 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 HLFQ16534 295 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 FAM204AQ9H8W3 233 aa19.51■□□□□ 0.71
PTPRA-205ENST00000399903 MRPL44Q9H9J2 332 aaKnown RBP19.51■□□□□ 0.71
PTPRA-205ENST00000399903 TBC1D2BQ9UPU7 963 aa19.5■□□□□ 0.71
PTPRA-205ENST00000399903 AKAP2Q9Y2D5 859 aa19.5■□□□□ 0.71
PTPRA-205ENST00000399903 LONRF3Q496Y0 759 aa19.5■□□□□ 0.71
PTPRA-205ENST00000399903 RTEL1Q9NZ71 1219 aa19.5■□□□□ 0.71
PTPRA-205ENST00000399903 COL15A1P39059 1388 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 XIRP1Q702N8 1843 aaKnown RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 H7C1W4 665 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 KCNJ6P48051 423 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 MCMDC2Q4G0Z9 681 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 MYCBPQ99417 103 aaPredicted RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 LLPHQ9BRT6 129 aaKnown RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 PLEKHG2Q9H7P9 1386 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 ATP2B1P20020 1258 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 LIG3P49916 1009 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 DHX8Q14562 1220 aaKnown RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 BRD3Q15059 726 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 RABL6Q3YEC7 729 aaPredicted RBP19.49■□□□□ 0.71
PTPRA-205ENST00000399903 KLHL10Q6JEL2 608 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 ATG9AQ7Z3C6 839 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 MED23Q9ULK4 1368 aa19.49■□□□□ 0.71
PTPRA-205ENST00000399903 FKBP4Q02790 459 aaKnown RBP eCLIP19.48■□□□□ 0.71
PTPRA-205ENST00000399903 MYSM1Q5VVJ2 828 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 PPM1EQ8WY54 764 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 KIF5CO60282 957 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 RXRAP19793 462 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 GUCY2CP25092 1073 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 MNAT1P51948 309 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 FOXN1O15353 648 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 VSNL1P62760 191 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 BEND6Q5SZJ8 279 aaPredicted RBP19.48■□□□□ 0.71
PTPRA-205ENST00000399903 PI16Q6UXB8 463 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 SRGAP1Q7Z6B7 1085 aa19.48■□□□□ 0.71
PTPRA-205ENST00000399903 ADORA1P30542 326 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 CASP8Q14790 479 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 ANO1Q5XXA6 986 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 AIFM3Q96NN9 605 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 SLC4A9Q96Q91 983 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 HSD3B7Q9H2F3 369 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 MROH7-TTC4A0A0A0MT08 1334 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 GOLGA8BA8MQT2 603 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 LRRC31Q6UY01 552 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 RIN2Q8WYP3 895 aaPredicted RBP19.47■□□□□ 0.71
PTPRA-205ENST00000399903 ANKZF1Q9H8Y5 726 aa19.47■□□□□ 0.71
PTPRA-205ENST00000399903 A0A1W2PQ27 194 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 CUTAO60888 179 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 CCDC175P0C221 793 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 FDPSP14324 419 aaKnown RBP19.46■□□□□ 0.71
PTPRA-205ENST00000399903 EP400NLQ6ZTU2 488 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
PTPRA-205ENST00000399903 NFE2L3Q9Y4A8 694 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 GOLGA6L9A6NEM1 432 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 KIF28PB7ZC32 967 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 KIFC2Q96AC6 838 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 PSD3Q9NYI0 1048 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 PRR29P0C7W0 189 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 PDE4BQ07343 736 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 CDC5LQ99459 802 aaKnown RBP19.46■□□□□ 0.71
PTPRA-205ENST00000399903 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 PCDHA5Q9Y5H7 936 aa19.46■□□□□ 0.71
PTPRA-205ENST00000399903 KLF18A0A0U1RQI7 1052 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 ZMYND10O75800 440 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 PIP4K2BP78356 416 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 AXDND1Q5T1B0 1012 aaPredicted RBP19.45■□□□□ 0.7
PTPRA-205ENST00000399903 GEMIN8Q9NWZ8 242 aaKnown RBP19.45■□□□□ 0.7
PTPRA-205ENST00000399903 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 E7EWF7 191 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 IKBKBO14920 756 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 STX17P56962 302 aa19.45■□□□□ 0.7
PTPRA-205ENST00000399903 TEX2Q8IWB9 1127 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms