RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 SEC24BO95487 1268 aa16.08■□□□□ 0.17
TNRC18-203ENST00000399537 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.17
TNRC18-203ENST00000399537 CALUO43852 315 aaPredicted RBP16.08■□□□□ 0.17
TNRC18-203ENST00000399537 ATP8B2P98198 1209 aa16.08■□□□□ 0.17
TNRC18-203ENST00000399537 ZNF75DP51815 510 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 ASIC2Q16515 512 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 CEP85Q6P2H3 762 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 TAOK1Q7L7X3 1001 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 LDHBP07195 334 aaKnown RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 IRX5P78411 483 aaPredicted RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 RRAGDQ9NQL2 400 aaPredicted RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 FANCAO15360 1455 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 TRIM14Q14142 442 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 C8orf74Q6P047 294 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 FNBP1Q96RU3 617 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 RNASE9P60153 205 aaKnown RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 NOX5Q96PH1 765 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 CACYBPQ9HB71 228 aaKnown RBP16.08■□□□□ 0.16
TNRC18-203ENST00000399537 GON4LQ3T8J9 2241 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 DAPK3O43293 454 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 ERCC3P19447 782 aa16.08■□□□□ 0.16
TNRC18-203ENST00000399537 GIPC1O14908 333 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
TNRC18-203ENST00000399537 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 TRPC3Q13507 836 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 CLNS1AP54105 237 aaKnown RBP16.07■□□□□ 0.16
TNRC18-203ENST00000399537 PRPF31Q8WWY3 499 aaKnown RBP16.07■□□□□ 0.16
TNRC18-203ENST00000399537 CHRNA2Q15822 529 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 JAG2Q9Y219 1238 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 MYRIPQ8NFW9 859 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
TNRC18-203ENST00000399537 ARHGEF2Q92974 986 aaKnown RBP16.07■□□□□ 0.16
TNRC18-203ENST00000399537 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
TNRC18-203ENST00000399537 IFT20Q8IY31 132 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 RXRAP19793 462 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 ZNF174Q15697 407 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 GABPB2Q8TAK5 448 aaPredicted RBP16.06■□□□□ 0.16
TNRC18-203ENST00000399537 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 SDCCAG8Q86SQ7 713 aaPredicted RBP16.06■□□□□ 0.16
TNRC18-203ENST00000399537 TRIM6Q9C030 488 aaPredicted RBP16.06■□□□□ 0.16
TNRC18-203ENST00000399537 FAM114A2Q9NRY5 505 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 CHMLP26374 656 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 MYL5Q02045 173 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 PSMD6Q15008 389 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 WDR7Q9Y4E6 1490 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 TNFAIP3P21580 790 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 MAP7Q14244 749 aa16.06■□□□□ 0.16
TNRC18-203ENST00000399537 ZRANB1Q9UGI0 708 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GBP7Q8N8V2 638 aaPredicted RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 FBLN1P23142 703 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 ARID4AP29374 1257 aaPredicted RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GABPB1Q06547 395 aaPredicted RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 CCDC89Q8N998 374 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
TNRC18-203ENST00000399537 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
TNRC18-203ENST00000399537 PLCD1P51178 756 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 TMCO4Q5TGY1 634 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 PICK1Q9NRD5 415 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 A0A1B0GVL5 298 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 KSR2Q6VAB6 950 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 CLSTN2Q9H4D0 955 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 CPA1P15085 419 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 STRN3Q13033 797 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 TFCP2Q12800 502 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 ZNF365Q70YC5 407 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 BIN2Q9UBW5 565 aaPredicted RBP16.04■□□□□ 0.16
TNRC18-203ENST00000399537 CCDC125Q86Z20 511 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 ANKRD2Q9GZV1 360 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 PPP2R5CQ13362 524 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 SH2D4BQ5SQS7 431 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 GPCPD1Q9NPB8 672 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 CASC4Q6P4E1 433 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 GSDMBQ8TAX9 411 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 ZCRB1Q8TBF4 217 aaKnown RBP16.04■□□□□ 0.16
TNRC18-203ENST00000399537 PARP3Q9Y6F1 533 aa16.04■□□□□ 0.16
TNRC18-203ENST00000399537 SETSIPP0DME0 302 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 INPP5BP32019 993 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
TNRC18-203ENST00000399537 ZKSCAN3Q9BRR0 538 aa16.03■□□□□ 0.16
TNRC18-203ENST00000399537 HAUS2Q9NVX0 235 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms