RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
SMAD9-203ENST00000399275 NMIQ13287 307 aaPredicted RBP10.71□□□□□ -0.69
SMAD9-203ENST00000399275 TERF2Q15554 542 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 NCOA7Q8NI08 942 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 SH2D4AQ9H788 454 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 SLC12A7Q9Y666 1083 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 FAM135BQ49AJ0 1406 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 MAGI2Q86UL8 1455 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 SGSM2O43147 1006 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 MYL6BP14649 208 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 PKP1Q13835 747 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 OSCARQ8IYS5 282 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 RGS22Q8NE09 1264 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 UBLCP1Q8WVY7 318 aaPredicted RBP10.71□□□□□ -0.69
SMAD9-203ENST00000399275 CAPS2Q9BXY5 557 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 RMND1Q9NWS8 449 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 N4BP3O15049 544 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 ALDH1L1O75891 902 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 CCDC159P0C7I6 412 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 GUCY2CP25092 1073 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 KRT83P78385 493 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 TRPC3Q13507 836 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 SLC30A9Q6PML9 568 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
SMAD9-203ENST00000399275 TADA2BQ86TJ2 420 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 FAM210AQ96ND0 272 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 CENPKQ9BS16 269 aa10.71□□□□□ -0.69
SMAD9-203ENST00000399275 TMED10P49755 219 aaKnown RBP10.71□□□□□ -0.7
SMAD9-203ENST00000399275 BRD3Q15059 726 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 MCMDC2Q4G0Z9 681 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 FBXO41Q8TF61 875 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 TM6SF1Q9BZW5 370 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 POLKQ9UBT6 870 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 PYCARDQ9ULZ3 195 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 TACC3Q9Y6A5 838 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 ADGRL1O94910 1474 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 CUL3Q13618 768 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.7
SMAD9-203ENST00000399275 KIAA2013Q8IYS2 634 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 AIDAQ96BJ3 306 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 TSNARE1Q96NA8 513 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 DAAM1Q9Y4D1 1078 aa10.71□□□□□ -0.7
SMAD9-203ENST00000399275 ARHGAP6O43182 974 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 BMP15O95972 392 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 RPS6KB1P23443 525 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 ATP5DP30049 168 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 CCDC68Q9H2F9 335 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 ZHX3Q9H4I2 956 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 AKR1B10O60218 316 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 EFCAB8A8MWE9 144 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 KRT86O43790 486 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 S100BP04271 92 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 TROVE2P10155 538 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 METAP2P50579 478 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 IKQ13123 557 aaPredicted RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 CYB5RLQ6IPT4 315 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 LRRC8AQ8IWT6 810 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 PPANQ9NQ55 473 aaKnown RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 FRMD4BQ9Y2L6 1034 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 SYF2O95926 243 aaKnown RBP10.7□□□□□ -0.7
SMAD9-203ENST00000399275 CNGA4Q8IV77 575 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 TEX11Q8IYF3 940 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 DRC3Q9H069 523 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 LZTFL1Q9NQ48 299 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 CNGB3Q9NQW8 809 aa10.7□□□□□ -0.7
SMAD9-203ENST00000399275 NBPF20Q3BBV1 942 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 MAP7D3Q8IWC1 876 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 SPAG5Q96R06 1193 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 MAP3K2Q9Y2U5 619 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 PTPDC1A2A3K4 754 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 ZRANB2O95218 330 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMAD9-203ENST00000399275 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
SMAD9-203ENST00000399275 SKIP12755 728 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 NBPF9Q3BBW0 867 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 CCDC122Q5T0U0 273 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
SMAD9-203ENST00000399275 RIMS2Q9UQ26 1411 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 PI4KAP2A4QPH2 592 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 AKR1B15C9JRZ8 316 aaPredicted RBP10.69□□□□□ -0.7
SMAD9-203ENST00000399275 POTEJP0CG39 1038 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 CUL4AQ13619 759 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 WAPLQ7Z5K2 1190 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 PI4KAP1Q8N8J0 262 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 FLCNQ8NFG4 579 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 TSG101Q99816 390 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
SMAD9-203ENST00000399275 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 MAP3K21Q5TCX8 1036 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 FAM71BQ8TC56 605 aa10.69□□□□□ -0.7
SMAD9-203ENST00000399275 RPGRIP1Q96KN7 1286 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms