RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 LDHBP07195 334 aaKnown RBP17.79■□□□□ 0.44
COL25A1-201ENST00000399126 RXRAP19793 462 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 SLC4A8Q2Y0W8 1093 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 ZNF274Q96GC6 653 aaPredicted RBP17.79■□□□□ 0.44
COL25A1-201ENST00000399126 ZKSCAN3Q9BRR0 538 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 GOLGA8BA8MQT2 603 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 EVCP57679 992 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 MFSD6Q6ZSS7 791 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 ZNF219Q9P2Y4 722 aaPredicted RBP17.78■□□□□ 0.44
COL25A1-201ENST00000399126 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
COL25A1-201ENST00000399126 IL1R1P14778 569 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 SMARCC2Q8TAQ2 1214 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 CNPY2Q9Y2B0 182 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
COL25A1-201ENST00000399126 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
COL25A1-201ENST00000399126 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
COL25A1-201ENST00000399126 PDCL3Q9H2J4 239 aa17.77■□□□□ 0.44
COL25A1-201ENST00000399126 ANGEL1Q9UNK9 670 aaKnown RBP17.77■□□□□ 0.44
COL25A1-201ENST00000399126 GPT2Q8TD30 523 aa17.77■□□□□ 0.44
COL25A1-201ENST00000399126 IGDCC4Q8TDY8 1250 aa17.77■□□□□ 0.44
COL25A1-201ENST00000399126 BBXQ8WY36 941 aaPredicted RBP17.77■□□□□ 0.44
COL25A1-201ENST00000399126 PRDM1O75626 825 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 USP17L21D6R901 530 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 CYP2D6P10635 497 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 SPTY2D1Q68D10 685 aaPredicted RBP17.76■□□□□ 0.43
COL25A1-201ENST00000399126 CTR9Q6PD62 1173 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 MPNDQ8N594 471 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 LY9Q9HBG7 655 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
COL25A1-201ENST00000399126 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 KIAA1551Q9HCM1 1747 aa17.76■□□□□ 0.43
COL25A1-201ENST00000399126 ALDH1B1P30837 517 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 DNM1Q05193 864 aaKnown RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 MFSD14BQ5SR56 506 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 SH3RF3Q8TEJ3 882 aaPredicted RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 GADD45BO75293 160 aaPredicted RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 FDPSP14324 419 aaKnown RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 BAG6P46379 1132 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 GTF2IP78347 998 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 TMEM67Q5HYA8 995 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 LLPHQ9BRT6 129 aaKnown RBP17.75■□□□□ 0.43
COL25A1-201ENST00000399126 MXD3Q9BW11 206 aa17.75■□□□□ 0.43
COL25A1-201ENST00000399126 QSER1Q2KHR3 1735 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 SF3B2Q13435 895 aaKnown RBP17.74■□□□□ 0.43
COL25A1-201ENST00000399126 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 MICU3Q86XE3 530 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
COL25A1-201ENST00000399126 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
COL25A1-201ENST00000399126 PDCP20941 246 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 KLHL40Q2TBA0 621 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 APOA5Q6Q788 366 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 FBXW7Q969H0 707 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 KRT23Q9C075 422 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 CNNM2Q9H8M5 875 aa17.74■□□□□ 0.43
COL25A1-201ENST00000399126 H0YIN7 160 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 FIBPO43427 364 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
COL25A1-201ENST00000399126 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
COL25A1-201ENST00000399126 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 LAMB1P07942 1786 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 USP17L8P0C7I0 530 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 PTMSP20962 102 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 GUCY1B3Q02153 619 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 TMEM87BQ96K49 555 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
COL25A1-201ENST00000399126 CDK5RAP2Q96SN8 1893 aa17.73■□□□□ 0.43
COL25A1-201ENST00000399126 CDC27P30260 824 aa17.72■□□□□ 0.43
COL25A1-201ENST00000399126 CLCN1P35523 988 aa17.72■□□□□ 0.43
COL25A1-201ENST00000399126 NFXL1Q6ZNB6 911 aa17.72■□□□□ 0.43
COL25A1-201ENST00000399126 RTFDC1Q9BY42 306 aaPredicted RBP17.72■□□□□ 0.43
COL25A1-201ENST00000399126 ZC3H12CQ9C0D7 883 aaKnown RBP17.72■□□□□ 0.43
COL25A1-201ENST00000399126 CAVIN1Q6NZI2 390 aaKnown RBP17.72■□□□□ 0.43
COL25A1-201ENST00000399126 KCNQ5Q9NR82 932 aa17.72■□□□□ 0.43
COL25A1-201ENST00000399126 GJB4Q9NTQ9 266 aa17.72■□□□□ 0.43
COL25A1-201ENST00000399126 MROH7-TTC4A0A0A0MT08 1334 aa17.71■□□□□ 0.43
COL25A1-201ENST00000399126 F8W031 263 aaPredicted RBP17.71■□□□□ 0.43
COL25A1-201ENST00000399126 CERS5Q8N5B7 392 aa17.71■□□□□ 0.43
COL25A1-201ENST00000399126 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.43
COL25A1-201ENST00000399126 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
COL25A1-201ENST00000399126 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
COL25A1-201ENST00000399126 H3BQV1 296 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 BTDP43251 543 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL25A1-201ENST00000399126 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 GIMAP6Q6P9H5 292 aa17.7■□□□□ 0.42
COL25A1-201ENST00000399126 TGFBRAP1Q8WUH2 860 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms