RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 RPGRQ92834 1020 aaKnown RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 PPP1R13BQ96KQ4 1090 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 A2MP01023 1474 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 ALDH3A1P30838 453 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 PPP1R2P41236 205 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 PNMA8AQ86V59 439 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 CACNA2D3Q8IZS8 1091 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.865e-6■■■□□ 17.3
CTNND1-205ENST00000399050 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 NELFBQ8WX92 580 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 KIAA1468Q9P260 1216 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
CTNND1-205ENST00000399050 URB2Q14146 1524 aaKnown RBP9.67□□□□□ -0.86
CTNND1-205ENST00000399050 SEC31AO94979 1220 aaKnown RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 FAM13AO94988 1023 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PLCB3Q01970 1234 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 NPATQ14207 1427 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 RGS12O14924 1447 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 TRAF5O00463 557 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PLCD1P51178 756 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 SF3A3Q12874 501 aaKnown RBP eCLIP9.66□□□□□ -0.862e-7■■■□□ 14.9
CTNND1-205ENST00000399050 CNNM4Q6P4Q7 775 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PPANQ9NQ55 473 aaKnown RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 HGSO14964 777 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 VWA3BQ502W6 1294 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 USP37Q86T82 979 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 MRFAP1L1Q96HT8 127 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 TMEM87BQ96K49 555 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 TRIM31Q9BZY9 425 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PDE11AQ9HCR9 933 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 SAR1BQ9Y6B6 198 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 HLA-DOAP06340 250 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 FLT4P35916 1363 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 ACTN4O43707 911 aaKnown RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 CD2BP2O95400 341 aaKnown RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 LIG3P49916 1009 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 FYB2Q5VWT5 728 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 ADALQ6DHV7 355 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PIK3AP1Q6ZUJ8 805 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 FAM71BQ8TC56 605 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 CAPS2Q9BXY5 557 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
CTNND1-205ENST00000399050 FEZ2Q9UHY8 353 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-205ENST00000399050 TAOK1Q7L7X3 1001 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 TM6SF1Q9BZW5 370 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 BAIAP2L1Q9UHR4 511 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 PLEKHA4Q9H4M7 779 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 ANGEL1Q9UNK9 670 aaKnown RBP9.65□□□□□ -0.86
CTNND1-205ENST00000399050 NUP153P49790 1475 aaKnown RBP9.65□□□□□ -0.86
CTNND1-205ENST00000399050 GCC2Q8IWJ2 1684 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.86
CTNND1-205ENST00000399050 TNNI2P48788 182 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 ETF1P62495 437 aaKnown RBP9.65□□□□□ -0.86
CTNND1-205ENST00000399050 TSNAXIP1Q2TAA8 658 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 ZNF526Q8TF50 670 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-205ENST00000399050 PHKBQ93100 1093 aa9.65□□□□□ -0.86
CTNND1-205ENST00000399050 PFKFB1P16118 471 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC65Q8IXS2 484 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 DIS3L2Q8IYB7 885 aaKnown RBP9.65□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.87
CTNND1-205ENST00000399050 PLCB1Q9NQ66 1216 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 RRP15Q9Y3B9 282 aaKnown RBP9.65□□□□□ -0.87
CTNND1-205ENST00000399050 POGZQ7Z3K3 1410 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 ABCC4O15439 1325 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 CEP104O60308 925 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 MTMR3Q13615 1198 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 NEDD9Q14511 834 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 TSKSQ9UJT2 592 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 TPCN1Q9ULQ1 816 aa9.65□□□□□ -0.87
CTNND1-205ENST00000399050 NOL3O60936 208 aaKnown RBP9.64□□□□□ -0.87
CTNND1-205ENST00000399050 MBD4O95243 580 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 GNA11P29992 359 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 IL13P35225 146 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 ZNF131P52739 623 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 CCDC51Q96ER9 411 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 RPGRIP1Q96KN7 1286 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 GUCY2FP51841 1108 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 KRT40Q6A162 431 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 KLHDC4Q8TBB5 520 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 ARHGEF2Q92974 986 aaKnown RBP9.64□□□□□ -0.87
CTNND1-205ENST00000399050 EYA1Q99502 592 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-205ENST00000399050 USP19O94966 1318 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 PSDA5PKW4 1024 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-205ENST00000399050 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
CTNND1-205ENST00000399050 MAGEA1P43355 309 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 PTH1RQ03431 593 aa9.64□□□□□ -0.87
CTNND1-205ENST00000399050 SF3B2Q13435 895 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms