RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MECOMQ03112 1051 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 ERO1BQ86YB8 467 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
VCX3A-202ENST00000398729 OTUD5Q96G74 571 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 TMEM106CQ9BVX2 250 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 IDI2Q9BXS1 227 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 SNCAIPQ9Y6H5 919 aa16.47■□□□□ 0.23
VCX3A-202ENST00000398729 MROH7-TTC4A0A0A0MT08 1334 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 ENTPD3O75355 529 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 LDHCP07864 332 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 BTDP43251 543 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 RGS3P49796 1198 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 TBC1D9Q6ZT07 1266 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 DBNDD2Q9BQY9 259 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 RAI14Q9P0K7 980 aa16.46■□□□□ 0.23
VCX3A-202ENST00000398729 GPR75-ASB3A0A0A6YYF3 556 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 CCL15-CCL14A0A0B4J2E2 113 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 CCL15Q16663 113 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 NSUN4Q96CB9 384 aaKnown RBP16.45■□□□□ 0.22
VCX3A-202ENST00000398729 ZFYVE28Q9HCC9 887 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
VCX3A-202ENST00000398729 INPP5BP32019 993 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 TAF1CQ15572 869 aaPredicted RBP16.44■□□□□ 0.22
VCX3A-202ENST00000398729 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 NBPF11Q86T75 865 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 ERC1Q8IUD2 1116 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
VCX3A-202ENST00000398729 ZFPM1Q8IX07 1006 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 CHMP4BQ9H444 224 aaKnown RBP16.44■□□□□ 0.22
VCX3A-202ENST00000398729 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
VCX3A-202ENST00000398729 A0A0C4DFX4 3053 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 DOCK2Q92608 1830 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 H0YGN5 161 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
VCX3A-202ENST00000398729 MAP4K4O95819 1239 aaPredicted RBP16.43■□□□□ 0.22
VCX3A-202ENST00000398729 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
VCX3A-202ENST00000398729 PPIL2Q13356 520 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 PICALMQ13492 652 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 ZNF384Q8TF68 577 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 ZNF512BQ96KM6 892 aaPredicted RBP16.43■□□□□ 0.22
VCX3A-202ENST00000398729 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 DBNLQ9UJU6 430 aaKnown RBP16.43■□□□□ 0.22
VCX3A-202ENST00000398729 EXOC6BQ9Y2D4 811 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
VCX3A-202ENST00000398729 IRF6O14896 467 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 CETPP11597 493 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 RHBDL3P58872 404 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 PPATQ06203 517 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 SLC4A8Q2Y0W8 1093 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
VCX3A-202ENST00000398729 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
VCX3A-202ENST00000398729 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
VCX3A-202ENST00000398729 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
VCX3A-202ENST00000398729 CCDC8Q9H0W5 538 aaPredicted RBP16.42■□□□□ 0.22
VCX3A-202ENST00000398729 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
VCX3A-202ENST00000398729 TLR2O60603 784 aa16.41■□□□□ 0.22
VCX3A-202ENST00000398729 IGSF3O75054 1194 aa16.41■□□□□ 0.22
VCX3A-202ENST00000398729 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
VCX3A-202ENST00000398729 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
VCX3A-202ENST00000398729 NOL9Q5SY16 702 aaKnown RBP16.41■□□□□ 0.22
VCX3A-202ENST00000398729 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
VCX3A-202ENST00000398729 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
VCX3A-202ENST00000398729 ATRNL1Q5VV63 1379 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 DDTLA6NHG4 134 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-202ENST00000398729 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 HMMRO75330 724 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-202ENST00000398729 CTGFP29279 349 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 LACTBP83111 547 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-202ENST00000398729 SH3BP5LQ7L8J4 393 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
VCX3A-202ENST00000398729 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
VCX3A-202ENST00000398729 MAST2Q6P0Q8 1798 aa16.4■□□□□ 0.22
VCX3A-202ENST00000398729 BAG3O95817 575 aa16.39■□□□□ 0.21
VCX3A-202ENST00000398729 ZAP70P43403 619 aa16.39■□□□□ 0.21
VCX3A-202ENST00000398729 MAP3K10Q02779 954 aa16.39■□□□□ 0.21
VCX3A-202ENST00000398729 AACSQ86V21 672 aa16.39■□□□□ 0.21
VCX3A-202ENST00000398729 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
VCX3A-202ENST00000398729 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 PLCG2P16885 1265 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 MTFR1Q15390 333 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 ZSWIM8A7E2V4 1837 aa16.38■□□□□ 0.21
VCX3A-202ENST00000398729 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-202ENST00000398729 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
VCX3A-202ENST00000398729 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
VCX3A-202ENST00000398729 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
VCX3A-202ENST00000398729 OSBPL5Q9H0X9 879 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms