RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 ZAP70P43403 619 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 TYRO3Q06418 890 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 GCKRQ14397 625 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
PCDHGA8-201ENST00000398604 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 NEMFO60524 1076 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 PARP1P09874 1014 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 PHKBQ93100 1093 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 RAD51AP2Q09MP3 1159 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 NAA15Q9BXJ9 866 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 PARP10Q53GL7 1025 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 STAMQ92783 540 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 PPLO60437 1756 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 TBC1D5Q92609 795 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 IMPG2Q9BZV3 1241 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 LZTFL1Q9NQ48 299 aa13.05□□□□□ -0.32
PCDHGA8-201ENST00000398604 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 LMAN1P49257 510 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 MCM6Q14566 821 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 IFNKQ9P0W0 207 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 FSD2A1L4K1 749 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 CAVIN2O95810 425 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 CYLC1P35663 651 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 TXKP42681 527 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 SPAG1Q07617 926 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
PCDHGA8-201ENST00000398604 APPBP2Q92624 585 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 TRAF5O00463 557 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 TECPR2O15040 1411 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 GTF2IP78347 998 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 RAPGEF1Q13905 1077 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 CCDC91Q7Z6B0 441 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 RBSNQ9H1K0 784 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 H0YIN7 160 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 MYCLP12524 364 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 SLC1A4P43007 532 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 UBXN1Q04323 297 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
PCDHGA8-201ENST00000398604 ATP2C2O75185 946 aa13.02□□□□□ -0.32
PCDHGA8-201ENST00000398604 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.32
PCDHGA8-201ENST00000398604 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.32
PCDHGA8-201ENST00000398604 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 ARL1P40616 181 aaPredicted RBP13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 USH1GQ495M9 461 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 FAM47AQ5JRC9 791 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 USP37Q86T82 979 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 DIS3L2Q8IYB7 885 aaKnown RBP13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 TGFBRAP1Q8WUH2 860 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 CAPZA3Q96KX2 299 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 CDC42BPGQ6DT37 1551 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 SLC27A2O14975 620 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 CTR9Q6PD62 1173 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
PCDHGA8-201ENST00000398604 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 CMTR1Q8N1G2 835 aaKnown RBP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 CCDC169A6NNP5 214 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 GYG1P46976 350 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 BIRC3Q13489 604 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 ZKSCAN5Q9Y2L8 839 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 CFBP00751 764 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 CCDC172P0C7W6 258 aa13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
PCDHGA8-201ENST00000398604 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms