RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
COLCA2-201ENST00000398035 MIGA2Q7L4E1 593 aa22.8■■□□□ 1.24
COLCA2-201ENST00000398035 ZFPM1Q8IX07 1006 aa22.8■■□□□ 1.24
COLCA2-201ENST00000398035 DHX36Q9H2U1 1008 aaKnown RBP22.8■■□□□ 1.24
COLCA2-201ENST00000398035 MAP3K10Q02779 954 aa22.79■■□□□ 1.24
COLCA2-201ENST00000398035 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.79■■□□□ 1.24
COLCA2-201ENST00000398035 ADGRA1Q86SQ6 560 aa22.79■■□□□ 1.24
COLCA2-201ENST00000398035 SH3RF3Q8TEJ3 882 aaPredicted RBP22.79■■□□□ 1.24
COLCA2-201ENST00000398035 WRNIP1Q96S55 665 aa22.79■■□□□ 1.24
COLCA2-201ENST00000398035 DDX4Q9NQI0 724 aaKnown RBP22.79■■□□□ 1.24
COLCA2-201ENST00000398035 ZNF112Q9UJU3 913 aa22.79■■□□□ 1.24
COLCA2-201ENST00000398035 MYH13Q9UKX3 1938 aa22.78■■□□□ 1.24
COLCA2-201ENST00000398035 TM4SF4P48230 202 aa22.78■■□□□ 1.24
COLCA2-201ENST00000398035 CLMNQ96JQ2 1002 aa22.78■■□□□ 1.24
COLCA2-201ENST00000398035 ZIC5Q96T25 663 aa22.78■■□□□ 1.24
COLCA2-201ENST00000398035 OSBPL5Q9H0X9 879 aaPredicted RBP22.78■■□□□ 1.24
COLCA2-201ENST00000398035 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 MANSC4A6NHS7 340 aaPredicted RBP22.77■■□□□ 1.24
COLCA2-201ENST00000398035 TBC1D12O60347 775 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 PDE6AP16499 860 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 LRRFIP1Q32MZ4 808 aaKnown RBP22.77■■□□□ 1.24
COLCA2-201ENST00000398035 SMC5Q8IY18 1101 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 SAGE1Q9NXZ1 904 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 ATRNL1Q5VV63 1379 aa22.77■■□□□ 1.24
COLCA2-201ENST00000398035 ECM29Q5VYK3 1845 aa22.77■■□□□ 1.23
COLCA2-201ENST00000398035 DDTLA6NHG4 134 aaPredicted RBP22.76■■□□□ 1.23
COLCA2-201ENST00000398035 FOXN1O15353 648 aa22.76■■□□□ 1.23
COLCA2-201ENST00000398035 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
COLCA2-201ENST00000398035 VGLL4Q14135 290 aa22.76■■□□□ 1.23
COLCA2-201ENST00000398035 TGFBRAP1Q8WUH2 860 aa22.76■■□□□ 1.23
COLCA2-201ENST00000398035 WNK4Q96J92 1243 aa22.76■■□□□ 1.23
COLCA2-201ENST00000398035 UBE3CQ15386 1083 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 SH3BP5LQ7L8J4 393 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 ERO1BQ86YB8 467 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 MIGA1Q8NAN2 632 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 ELP3Q9H9T3 547 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 PI4KBQ9UBF8 816 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 ZNF532Q9HCE3 1301 aa22.75■■□□□ 1.23
COLCA2-201ENST00000398035 MAGEB6P1A0A0J9YX57 407 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 MX1P20591 662 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 FOXP4Q8IVH2 680 aaPredicted RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 OPTNQ96CV9 577 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 PRDM10Q9NQV6 1147 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 ALDH1A1P00352 501 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 ADD2P35612 726 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 USP5P45974 858 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 DYNLL1P63167 89 aaKnown RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 OTUD7BQ6GQQ9 843 aa22.74■■□□□ 1.23
COLCA2-201ENST00000398035 ZKSCAN4Q969J2 545 aaPredicted RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 HERC5Q9UII4 1024 aaKnown RBP22.74■■□□□ 1.23
COLCA2-201ENST00000398035 COL2A1P02458 1487 aaPredicted RBP22.73■■□□□ 1.23
COLCA2-201ENST00000398035 SPDYE5A6NIY4 337 aa22.73■■□□□ 1.23
COLCA2-201ENST00000398035 PPATQ06203 517 aa22.73■■□□□ 1.23
COLCA2-201ENST00000398035 MKRN3Q13064 507 aaKnown RBP22.73■■□□□ 1.23
COLCA2-201ENST00000398035 MAPKAPK5Q8IW41 473 aa22.73■■□□□ 1.23
COLCA2-201ENST00000398035 KBTBD3Q8NAB2 608 aa22.73■■□□□ 1.23
COLCA2-201ENST00000398035 RIOK1Q9BRS2 568 aaKnown RBP22.73■■□□□ 1.23
COLCA2-201ENST00000398035 CRNKL1Q9BZJ0 848 aaKnown RBP22.73■■□□□ 1.23
COLCA2-201ENST00000398035 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.73■■□□□ 1.236e-19■■■■■ 53.5
COLCA2-201ENST00000398035 RNF186Q9NXI6 227 aa22.73■■□□□ 1.23
COLCA2-201ENST00000398035 TCRBV5S4A2TA0A5A2 114 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 CTNND1O60716 968 aaKnown RBP22.72■■□□□ 1.23
COLCA2-201ENST00000398035 IGHDP01880 384 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 HLA-DOAP06340 250 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 ZFYP08048 801 aaPredicted RBP22.72■■□□□ 1.23
COLCA2-201ENST00000398035 GTF2A2P52657 109 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 NOL9Q5SY16 702 aaKnown RBP22.72■■□□□ 1.23
COLCA2-201ENST00000398035 STAP2Q9UGK3 403 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 SNCAIPQ9Y6H5 919 aa22.72■■□□□ 1.23
COLCA2-201ENST00000398035 FLT1P17948 1338 aa22.71■■□□□ 1.23
COLCA2-201ENST00000398035 AKAP11Q9UKA4 1901 aa22.71■■□□□ 1.23
COLCA2-201ENST00000398035 PHF20L1A8MW92 1017 aa22.71■■□□□ 1.23
COLCA2-201ENST00000398035 TRPA1O75762 1119 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 INPP5BP32019 993 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 LBX1P52954 281 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 TTC6Q86TZ1 520 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 CHD1LQ86WJ1 897 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 PI4K2BQ8TCG2 481 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 TRIM34Q9BYJ4 488 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 PICK1Q9NRD5 415 aa22.7■■□□□ 1.22
COLCA2-201ENST00000398035 MYH2Q9UKX2 1941 aa22.69■■□□□ 1.22
COLCA2-201ENST00000398035 TESPA1A2RU30 521 aaPredicted RBP22.69■■□□□ 1.22
COLCA2-201ENST00000398035 HSPA8P11142 646 aaKnown RBP22.69■■□□□ 1.22
COLCA2-201ENST00000398035 NUCB1Q02818 461 aa22.69■■□□□ 1.22
COLCA2-201ENST00000398035 PPIL2Q13356 520 aa22.69■■□□□ 1.22
COLCA2-201ENST00000398035 THSD7BQ9C0I4 1608 aa22.69■■□□□ 1.22
COLCA2-201ENST00000398035 PDE1AP54750 535 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
COLCA2-201ENST00000398035 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 METTL16Q86W50 562 aaKnown RBP22.68■■□□□ 1.22
COLCA2-201ENST00000398035 TICAM2Q86XR7 235 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 SCYL3Q8IZE3 742 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 OTUD7AQ8TE49 926 aaPredicted RBP22.68■■□□□ 1.22
COLCA2-201ENST00000398035 OTUD5Q96G74 571 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 PALD1Q9ULE6 856 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
COLCA2-201ENST00000398035 RNF113AO15541 343 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms