RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SGMS1Q86VZ5 419 aa21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 AOPEPQ8N6M6 819 aa21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 MFSD6Q6ZSS7 791 aa21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 COL4A1P02462 1669 aa21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ZNF202O95125 648 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CEP57L1Q8IYX8 460 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 MYRIPQ8NFW9 859 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 KIAA1468Q9P260 1216 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 BIN1O00499 593 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 KCNQ4P56696 695 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 DPCR1Q3MIW9 517 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SARM1Q6SZW1 724 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CACTINQ8WUQ7 758 aaKnown RBP21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 MROH7-TTC4A0A0A0MT08 1334 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 DOCK2Q92608 1830 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 PFKFB1P16118 471 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ABCF2Q9UG63 623 aa21.25■□□□□ 0.99
CHRFAM7A-202ENST00000397827 COL22A1Q8NFW1 1626 aaPredicted RBP21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SLC39A14Q15043 492 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ADGRA1Q86SQ6 560 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 PRIMPOLQ96LW4 560 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 LIFRP42702 1097 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ARID5BQ14865 1188 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SMIM5Q71RC9 77 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ZNF710Q8N1W2 664 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CCDC82Q8N4S0 544 aa21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 THRAP3Q9Y2W1 955 aaKnown RBP21.24■□□□□ 0.99
CHRFAM7A-202ENST00000397827 GYG1P46976 350 aa21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CHD4Q14839 1912 aa21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CMTR1Q8N1G2 835 aaKnown RBP21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SDR42E1Q8WUS8 393 aa21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 NACAP1Q9BZK3 213 aa21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CNNM2Q9H8M5 875 aa21.23■□□□□ 0.99
CHRFAM7A-202ENST00000397827 AHDC1Q5TGY3 1603 aaPredicted RBP21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SMIM22K7EJ46 135 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CMA1P23946 247 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 GUCY1A2P33402 732 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 TRIM29Q14134 588 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 KRT23Q9C075 422 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ZBTB22O15209 634 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 IGSF3O75054 1194 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SLC3A2P08195 630 aaKnown RBP21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CYP7A1P22680 504 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CDC25BP30305 580 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ZRSR1Q15695 479 aaKnown RBP21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ERFEQ4G0M1 354 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 ISM2Q6H9L7 571 aa21.22■□□□□ 0.99
CHRFAM7A-202ENST00000397827 SSRP1Q08945 709 aaKnown RBP21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 MRFAP1L1Q96HT8 127 aa21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 NAT10Q9H0A0 1025 aaKnown RBP21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 CLIC6Q96NY7 704 aa21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
CHRFAM7A-202ENST00000397827 TAF1P21675 1872 aa21.2■□□□□ 0.99
CHRFAM7A-202ENST00000397827 GNAT2P19087 354 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 PTPAQ15257 358 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 FILIP1Q7Z7B0 1213 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CGNQ9P2M7 1197 aaKnown RBP21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ECM29Q5VYK3 1845 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RTL9Q8NET4 1388 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SPATA31A5Q5VU36 1347 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SPATA31A7Q8IWB4 1347 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 MINDY4BA8MYZ0 360 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SHC4Q6S5L8 630 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CDC5LQ99459 802 aaKnown RBP21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 MAP3K14Q99558 947 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RAI14Q9P0K7 980 aa21.2■□□□□ 0.98
CHRFAM7A-202ENST00000397827 U2AF2P26368 475 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 WTAPQ15007 396 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ZNF652Q9Y2D9 606 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SPDYE4A6NLX3 237 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 C16orf45Q96MC5 204 aaPredicted RBP21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 KCNJ14Q9UNX9 436 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 FMNL1O95466 1100 aaPredicted RBP21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SYKP43405 635 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 LRRC8AQ8IWT6 810 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 NUP133Q8WUM0 1156 aa21.19■□□□□ 0.98
CHRFAM7A-202ENST00000397827 BTBD18B2RXH4 712 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 IFNAR1P17181 557 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 PPARAQ07869 468 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ANKRD18AQ8IVF6 992 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 SART3Q15020 963 aaKnown RBP21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RTN1Q16799 776 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 LINC00116Q8NCU8 138 aa21.18■□□□□ 0.98
CHRFAM7A-202ENST00000397827 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
CHRFAM7A-202ENST00000397827 ERICH2A1L162 156 aa21.17■□□□□ 0.98
CHRFAM7A-202ENST00000397827 PPP6R2O75170 966 aa21.17■□□□□ 0.98
CHRFAM7A-202ENST00000397827 RGS22Q8NE09 1264 aa21.17■□□□□ 0.98
CHRFAM7A-202ENST00000397827 CDK11BP21127 795 aaKnown RBP21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 TAF3Q5VWG9 929 aa21.16■□□□□ 0.98
CHRFAM7A-202ENST00000397827 JMYQ8N9B5 988 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms