RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 REC8O95072 547 aa23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 PICALMQ13492 652 aa23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 ALX1Q15699 326 aa23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 IFNL3Q8IZI9 196 aa23.28■■□□□ 1.32
MAP1LC3A-203ENST00000397709 BAZ2AQ9UIF9 1905 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 TCP10L2B9ZVM9 353 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 SEC24BO95487 1268 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 APPP05067 770 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 FAM83AQ86UY5 434 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 APOBEC3FQ8IUX4 373 aaKnown RBP23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 MAP4K1Q92918 833 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 BACH2Q9BYV9 841 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 NACAP1Q9BZK3 213 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 OSBPL5Q9H0X9 879 aaPredicted RBP23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 COL2A1P02458 1487 aaPredicted RBP23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 MYH1P12882 1939 aa23.27■■□□□ 1.32
MAP1LC3A-203ENST00000397709 TNFAIP1Q13829 316 aa23.26■■□□□ 1.31
MAP1LC3A-203ENST00000397709 EPB41L2O43491 1005 aaKnown RBP23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 FGAP02671 866 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 TDO2P48775 406 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 TNNI2P48788 182 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 TCP10Q12799 353 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 ZFPM1Q8IX07 1006 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 FAM151AQ8WW52 585 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 NAPBQ9H115 298 aa23.25■■□□□ 1.31
MAP1LC3A-203ENST00000397709 LAMB1P07942 1786 aa23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 POLR2AP24928 1970 aaKnown RBP23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 POTEIP0CG38 1075 aa23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 POTEJP0CG39 1038 aa23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 GPBP1L1Q9HC44 474 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 U3KPZ7 1027 aaPredicted RBP23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 ATRNL1Q5VV63 1379 aa23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
MAP1LC3A-203ENST00000397709 YY1P25490 414 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 RASA3Q14644 834 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 SBK1Q52WX2 424 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 CTR9Q6PD62 1173 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 LDHDQ86WU2 507 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 DCPSQ96C86 337 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 USP26Q9BXU7 913 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 MCM9Q9NXL9 1143 aa23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 ARPP21Q9UBL0 812 aaPredicted RBP23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 SAP30BPQ9UHR5 308 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 SCAF8Q9UPN6 1271 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 RBM8AQ9Y5S9 174 aaKnown RBP23.23■■□□□ 1.31
MAP1LC3A-203ENST00000397709 USP17L12C9JPN9 530 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 USP17L21D6R901 530 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 SH3BP5LQ7L8J4 393 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 DEFB129Q9H1M3 183 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 CTNNA3Q9UI47 895 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 PPP2R3BQ9Y5P8 575 aa23.22■■□□□ 1.31
MAP1LC3A-203ENST00000397709 DHX36Q9H2U1 1008 aaKnown RBP23.21■■□□□ 1.31
MAP1LC3A-203ENST00000397709 PALD1Q9ULE6 856 aa23.21■■□□□ 1.31
MAP1LC3A-203ENST00000397709 CLEC11AQ9Y240 323 aa23.21■■□□□ 1.31
MAP1LC3A-203ENST00000397709 SIPA1L1O43166 1804 aa23.21■■□□□ 1.31
MAP1LC3A-203ENST00000397709 DDTLA6NHG4 134 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 POLR3DP05423 398 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CYP2D6P10635 497 aa23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 C12orf60Q5U649 245 aa23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 SULF1Q8IWU6 871 aa23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 TEPSINQ96N21 525 aa23.2■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CYP2D7A0A087X1C5 515 aa23.19■■□□□ 1.3
MAP1LC3A-203ENST00000397709 NECTIN1Q15223 517 aa23.19■■□□□ 1.3
MAP1LC3A-203ENST00000397709 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CDAN1Q8IWY9 1227 aa23.19■■□□□ 1.3
MAP1LC3A-203ENST00000397709 AMOTL1Q8IY63 956 aa23.19■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ROBO3Q96MS0 1386 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ADM5C9JUS6 153 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 KIF3CO14782 793 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 PLCD1P51178 756 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 EVX2Q03828 476 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 PPARAQ07869 468 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 TTC6Q86TZ1 520 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ANAPC4Q9UJX5 808 aa23.18■■□□□ 1.3
MAP1LC3A-203ENST00000397709 MINDY4BA8MYZ0 360 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 SMIM22K7EJ46 135 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 HLA-DOAP06340 250 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 HSPA4P34932 840 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 IMMTQ16891 758 aaKnown RBP23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 SLC4A8Q2Y0W8 1093 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 MAP1SQ66K74 1059 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CREB3L3Q68CJ9 461 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CDC37L1Q7L3B6 337 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ZSCAN29Q8IWY8 852 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CSRNP1Q96S65 589 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 EHD4Q9H223 541 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 PI4KBQ9UBF8 816 aa23.17■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ZNF213O14771 459 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 SLC27A2O14975 620 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 CYP21A2P08686 494 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 HAND2P61296 217 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 USP48Q86UV5 1035 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 METTL16Q86W50 562 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 KCNB2Q92953 911 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 GLIS2Q9BZE0 524 aaPredicted RBP23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 NBPF3Q9H094 633 aa23.16■■□□□ 1.3
MAP1LC3A-203ENST00000397709 ZNF784Q8NCA9 323 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms