RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 MCCP23508 829 aa20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 NBPF9Q3BBW0 867 aa20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 ANGEL2Q5VTE6 544 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 KIF2CQ99661 725 aa20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 PALD1Q9ULE6 856 aa20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-205ENST00000397406 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 GNAT2P19087 354 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 PPP4CP60510 307 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 GRM1Q13255 1194 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 KCNB2Q92953 911 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 MRIQ9BWK5 157 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 DAGLAQ9Y4D2 1042 aa20.23■□□□□ 0.83
TSPAN4-205ENST00000397406 PATL2C9JE40 543 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 HHIPL2Q6UWX4 724 aa20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 HHIPL1Q96JK4 782 aa20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 SLC4A4Q9Y6R1 1079 aa20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 LAMB1P07942 1786 aa20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-205ENST00000397406 GSG1L2A8MUP6 293 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 PRKAB2O43741 272 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 BTDP43251 543 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 ANAPC15P60006 121 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 ALX1Q15699 326 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 PAXIP1Q6ZW49 1069 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 ZBED3Q96IU2 234 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 EPB41L4AQ9HCS5 686 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 DDX60LQ5H9U9 1706 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 ZMYM6O95789 1325 aa20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 POLR2AP24928 1970 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-205ENST00000397406 WNT10BO00744 389 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 SLC27A2O14975 620 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 BAG3O95817 575 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 FGAP02671 866 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 HSPA8P11142 646 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 RASEFQ8IZ41 740 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 TEKT1Q969V4 418 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 CDCA5Q96FF9 252 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 SNX14Q9Y5W7 946 aa20.2■□□□□ 0.82
TSPAN4-205ENST00000397406 FAM155AB1AL88 458 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 ECE1P42892 770 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 CRKP46108 304 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 LBX1P52954 281 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 PRAMEF18Q5VWM3 479 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 IFNL3Q8IZI9 196 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 SH3RF3Q8TEJ3 882 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 SDR42E1Q8WUS8 393 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 GBA2Q9HCG7 927 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 APPP05067 770 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 HUNKP57058 714 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 RHBDL3P58872 404 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 SULF1Q8IWU6 871 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 TNS4Q8IZW8 715 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 CRNKL1Q9BZJ0 848 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 SERPINA10Q9UK55 444 aa20.19■□□□□ 0.82
TSPAN4-205ENST00000397406 MYH1P12882 1939 aa20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 CYP21A2P08686 494 aa20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 CTCFP49711 727 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 MAP2K1Q02750 393 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 TAF6LQ9Y6J9 622 aa20.18■□□□□ 0.82
TSPAN4-205ENST00000397406 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 PLCG2P16885 1265 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 MAP2K2P36507 400 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 TSGA10IPQ3SY00 556 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 APOBEC3HQ6NTF7 200 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 GIMAP6Q6P9H5 292 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 MOB2Q70IA6 237 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 NACAP1Q9BZK3 213 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
TSPAN4-205ENST00000397406 NAPBQ9H115 298 aa20.16■□□□□ 0.82
TSPAN4-205ENST00000397406 ATP8A2Q9NTI2 1148 aa20.16■□□□□ 0.82
TSPAN4-205ENST00000397406 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-205ENST00000397406 DCP1AQ9NPI6 582 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-205ENST00000397406 TSKSQ9UJT2 592 aa20.15■□□□□ 0.82
TSPAN4-205ENST00000397406 HDAC9Q9UKV0 1011 aa20.15■□□□□ 0.82
TSPAN4-205ENST00000397406 TDO2P48775 406 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 ADCK5Q3MIX3 580 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 CFAP100Q494V2 611 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 RGMBQ6NW40 437 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 CDC42EP5Q6NZY7 148 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 TEX11Q8IYF3 940 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 C2orf69Q8N8R5 385 aa20.14■□□□□ 0.81
TSPAN4-205ENST00000397406 USP5P45974 858 aa20.13■□□□□ 0.81
TSPAN4-205ENST00000397406 RABEP1Q15276 862 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms