RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
SEC13-209ENST00000397117 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
SEC13-209ENST00000397117 GOLIM4O00461 696 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 RBM5P52756 815 aaKnown RBP eCLIP15.97■□□□□ 0.15
SEC13-209ENST00000397117 TDRD7Q8NHU6 1098 aaKnown RBP15.97■□□□□ 0.15
SEC13-209ENST00000397117 TEPSINQ96N21 525 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 ARAP2Q8WZ64 1704 aa15.97■□□□□ 0.15
SEC13-209ENST00000397117 HIP1O00291 1037 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 EN2P19622 333 aaPredicted RBP15.96■□□□□ 0.15
SEC13-209ENST00000397117 CHMLP26374 656 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 GYG1P46976 350 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 OPTNQ96CV9 577 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 ELP3Q9H9T3 547 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 DIAPH3Q9NSV4 1193 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 SERPINA10Q9UK55 444 aa15.96■□□□□ 0.15
SEC13-209ENST00000397117 HIBADHP31937 336 aaKnown RBP15.95■□□□□ 0.14
SEC13-209ENST00000397117 MCAMP43121 646 aa15.95■□□□□ 0.14
SEC13-209ENST00000397117 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
SEC13-209ENST00000397117 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.95■□□□□ 0.14
SEC13-209ENST00000397117 EDC3Q96F86 508 aaKnown RBP15.95■□□□□ 0.14
SEC13-209ENST00000397117 FAM84BQ96KN1 310 aaPredicted RBP15.95■□□□□ 0.14
SEC13-209ENST00000397117 TDRD3Q9H7E2 651 aaKnown RBP15.95■□□□□ 0.14
SEC13-209ENST00000397117 FRAT2O75474 233 aaPredicted RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 SEC24BO95487 1268 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 ZAP70P43403 619 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 LRRFIP1Q32MZ4 808 aaKnown RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 MFSD14BQ5SR56 506 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 CDAN1Q8IWY9 1227 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 SPATA5Q8NB90 893 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 TTF2Q9UNY4 1162 aaKnown RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 MKI67P46013 3256 aaKnown RBP15.94■□□□□ 0.14
SEC13-209ENST00000397117 RASGRF1Q13972 1273 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 KBTBD3Q8NAB2 608 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 RUFY2Q8WXA3 655 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 CNKSR2Q8WXI2 1034 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 BRI3BPQ8WY22 251 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 HMG20BQ9P0W2 317 aa15.94■□□□□ 0.14
SEC13-209ENST00000397117 CENPFP49454 3210 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 MAP3K9P80192 1104 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 ZNF333Q96JL9 665 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
SEC13-209ENST00000397117 AK9Q5TCS8 1911 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 CEP290O15078 2479 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 SEMA3EO15041 775 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.92■□□□□ 0.142e-11■□□□□ 8.9
SEC13-209ENST00000397117 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 TMEM39BQ9GZU3 492 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
SEC13-209ENST00000397117 RFX7Q2KHR2 1363 aa15.92■□□□□ 0.14
SEC13-209ENST00000397117 CCL15-CCL14A0A0B4J2E2 113 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 TCP10L2B9ZVM9 353 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 REC8O95072 547 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 CRKP46108 304 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 GTF2A2P52657 109 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 VGLL4Q14135 290 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 GRIK5Q16478 980 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 CCL15Q16663 113 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 CWC27Q6UX04 472 aaKnown RBP15.91■□□□□ 0.14
SEC13-209ENST00000397117 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.91■□□□□ 0.144e-8■□□□□ 10.1
SEC13-209ENST00000397117 ANTXR1Q9H6X2 564 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 ZFYVE28Q9HCC9 887 aa15.91■□□□□ 0.14
SEC13-209ENST00000397117 CYP2E1P05181 493 aaPredicted RBP15.9■□□□□ 0.14
SEC13-209ENST00000397117 ARHGEF6Q15052 776 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 TAF1CQ15572 869 aaPredicted RBP15.9■□□□□ 0.14
SEC13-209ENST00000397117 FAM43AQ8N2R8 423 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 TNNI2P48788 182 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 HDLBPQ00341 1268 aaKnown RBP15.9■□□□□ 0.14
SEC13-209ENST00000397117 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 PTCH2Q9Y6C5 1203 aa15.9■□□□□ 0.14
SEC13-209ENST00000397117 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
SEC13-209ENST00000397117 IDH1O75874 414 aaKnown RBP15.89■□□□□ 0.13
SEC13-209ENST00000397117 ZFYP08048 801 aaPredicted RBP15.89■□□□□ 0.13
SEC13-209ENST00000397117 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
SEC13-209ENST00000397117 SPDYE5A6NIY4 337 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 SGSM2O43147 1006 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 MAP3K12Q12852 859 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 KIAA1211Q6ZU35 1233 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 PIH1D3Q9NQM4 214 aaKnown RBP15.88■□□□□ 0.13
SEC13-209ENST00000397117 CSADQ9Y600 493 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 ZSWIM8A7E2V4 1837 aa15.88■□□□□ 0.13
SEC13-209ENST00000397117 PDS5AQ29RF7 1337 aaKnown RBP15.88■□□□□ 0.13
SEC13-209ENST00000397117 ZBTB22O15209 634 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 FXR1P51114 621 aaKnown RBP eCLIP15.87■□□□□ 0.13
SEC13-209ENST00000397117 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
SEC13-209ENST00000397117 SLC9C1Q4G0N8 1177 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 MRIQ9BWK5 157 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 ANO2Q9NQ90 1003 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 LRP2BPQ9P2M1 347 aa15.87■□□□□ 0.13
SEC13-209ENST00000397117 SNCAIPQ9Y6H5 919 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms