RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.05■□□□□ 0.16
NUP98-204ENST00000397004 RIPOR2Q9Y4F9 1068 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
NUP98-204ENST00000397004 METAP2P50579 478 aaKnown RBP eCLIP16.05■□□□□ 0.16
NUP98-204ENST00000397004 CCDC158Q5M9N0 1113 aa16.05■□□□□ 0.16
NUP98-204ENST00000397004 A0A0U1RQG5 324 aaPredicted RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 ST5P78524 1137 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 DESI2Q9BSY9 194 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 ZBTB9Q96C00 473 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 EPB41L4AQ9HCS5 686 aaPredicted RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 TMEM51Q9NW97 253 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 TCRBV5S4A2TA0A5A2 114 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 SMIM22K7EJ46 135 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 SNAP23O00161 211 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 CSF1RP07333 972 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 VGLL2Q8N8G2 317 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 MAN1B1Q9UKM7 699 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
NUP98-204ENST00000397004 SPATA31A3Q5VYP0 1347 aa16.04■□□□□ 0.16
NUP98-204ENST00000397004 MAP3K9P80192 1104 aa16.03■□□□□ 0.16
NUP98-204ENST00000397004 CCDC57Q2TAC2 916 aa16.03■□□□□ 0.16
NUP98-204ENST00000397004 SLC9C2Q5TAH2 1124 aa16.03■□□□□ 0.16
NUP98-204ENST00000397004 APTXQ7Z2E3 356 aaKnown RBP16.03■□□□□ 0.16
NUP98-204ENST00000397004 SAMSN1Q9NSI8 373 aaKnown RBP16.03■□□□□ 0.16
NUP98-204ENST00000397004 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
NUP98-204ENST00000397004 KCNJ14Q9UNX9 436 aa16.03■□□□□ 0.16
NUP98-204ENST00000397004 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
NUP98-204ENST00000397004 WDR19Q8NEZ3 1342 aa16.03■□□□□ 0.16
NUP98-204ENST00000397004 ABL1P00519 1130 aa16.02■□□□□ 0.16
NUP98-204ENST00000397004 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.16
NUP98-204ENST00000397004 SARSP49591 514 aaKnown RBP16.02■□□□□ 0.16
NUP98-204ENST00000397004 GREM2Q9H772 168 aa16.02■□□□□ 0.16
NUP98-204ENST00000397004 PAPPAQ13219 1627 aa16.02■□□□□ 0.16
NUP98-204ENST00000397004 ZSWIM5Q9P217 1185 aa16.02■□□□□ 0.16
NUP98-204ENST00000397004 A0A087X0B3 334 aa16.02■□□□□ 0.15
NUP98-204ENST00000397004 TOP1P11387 765 aaKnown RBP16.02■□□□□ 0.15
NUP98-204ENST00000397004 CTDSPL2Q05D32 466 aa16.02■□□□□ 0.15
NUP98-204ENST00000397004 TCIRG1Q13488 830 aa16.02■□□□□ 0.15
NUP98-204ENST00000397004 HLFQ16534 295 aa16.02■□□□□ 0.15
NUP98-204ENST00000397004 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.15
NUP98-204ENST00000397004 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.15
NUP98-204ENST00000397004 LRP6O75581 1613 aa16.02■□□□□ 0.15
NUP98-204ENST00000397004 WNT7AO00755 349 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 CAPN2P17655 700 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 CASP1P29466 404 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 GYS2P54840 703 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 NR5A1Q13285 461 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 UBXN4Q92575 508 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 MRFAP1Q9Y605 127 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 POLR3GO15318 223 aaPredicted RBP16.01■□□□□ 0.15
NUP98-204ENST00000397004 TEX33O43247 280 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 PHKA1P46020 1223 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
NUP98-204ENST00000397004 LRRFIP1Q32MZ4 808 aaKnown RBP16.01■□□□□ 0.15
NUP98-204ENST00000397004 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
NUP98-204ENST00000397004 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
NUP98-204ENST00000397004 CC2D1AQ6P1N0 951 aaPredicted RBP16■□□□□ 0.15
NUP98-204ENST00000397004 DHX58Q96C10 678 aa16■□□□□ 0.15
NUP98-204ENST00000397004 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
NUP98-204ENST00000397004 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
NUP98-204ENST00000397004 FAM205CA6NFA0 338 aa16■□□□□ 0.15
NUP98-204ENST00000397004 EFCAB8A8MWE9 144 aa16■□□□□ 0.15
NUP98-204ENST00000397004 HNRNPH2P55795 449 aaKnown RBP16■□□□□ 0.15
NUP98-204ENST00000397004 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
NUP98-204ENST00000397004 TTLL11Q8NHH1 800 aa16■□□□□ 0.15
NUP98-204ENST00000397004 BAG1Q99933 345 aaPredicted RBP16■□□□□ 0.15
NUP98-204ENST00000397004 ATRNO75882 1429 aa16■□□□□ 0.15
NUP98-204ENST00000397004 SHANK3Q9BYB0 1731 aa16■□□□□ 0.15
NUP98-204ENST00000397004 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
NUP98-204ENST00000397004 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
NUP98-204ENST00000397004 EARS2Q5JPH6 523 aaKnown RBP16■□□□□ 0.15
NUP98-204ENST00000397004 CCDC82Q8N4S0 544 aa16■□□□□ 0.15
NUP98-204ENST00000397004 NEK11Q8NG66 645 aa16■□□□□ 0.15
NUP98-204ENST00000397004 STRBPQ96SI9 672 aaKnown RBP16■□□□□ 0.15
NUP98-204ENST00000397004 ZKSCAN3Q9BRR0 538 aa16■□□□□ 0.15
NUP98-204ENST00000397004 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
NUP98-204ENST00000397004 SOWAHDA6NJG2 315 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 ARHGAP6O43182 974 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
NUP98-204ENST00000397004 CCDC102BQ68D86 513 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 CUTAO60888 179 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 IDH1O75874 414 aaKnown RBP15.99■□□□□ 0.15
NUP98-204ENST00000397004 GNG11P61952 73 aa15.99■□□□□ 0.15
NUP98-204ENST00000397004 MORC3Q14149 939 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms