RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 ZNF274Q96GC6 653 aaPredicted RBP17.57■□□□□ 0.4
GNE-202ENST00000396594 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
GNE-202ENST00000396594 TTF2Q9UNY4 1162 aaKnown RBP17.57■□□□□ 0.4
GNE-202ENST00000396594 PA2G4Q9UQ80 394 aaKnown RBP17.57■□□□□ 0.4
GNE-202ENST00000396594 SPATA31E1Q6ZUB1 1445 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 NIM1KQ8IY84 436 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 TSPYL6Q8N831 410 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 GOLGA1Q92805 767 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 PUF60Q9UHX1 559 aaKnown RBP17.57■□□□□ 0.4
GNE-202ENST00000396594 DHX58Q96C10 678 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 CNPY2Q9Y2B0 182 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 IVLP07476 585 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 NECAB1Q8N987 351 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 SSH3Q8TE77 659 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
GNE-202ENST00000396594 BIN1O00499 593 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 NLRX1Q86UT6 975 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 ZBTB38Q8NAP3 1195 aaPredicted RBP17.56■□□□□ 0.4
GNE-202ENST00000396594 TRIM37O94972 964 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 ALDH3A1P30838 453 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 CTSWP56202 376 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 DDAH1O94760 285 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 GAS8O95995 478 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 SKILP12757 684 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 LIN9Q5TKA1 542 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 CCDC51Q96ER9 411 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 CDC42BPGQ6DT37 1551 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 NLGN1Q8N2Q7 840 aa17.56■□□□□ 0.4
GNE-202ENST00000396594 GPAA1O43292 621 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 AFMP43652 599 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
GNE-202ENST00000396594 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 ARFGAP3Q9NP61 516 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 SYT1P21579 422 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 TCHPQ9BT92 498 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
GNE-202ENST00000396594 USP19O94966 1318 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 STRN3Q13033 797 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 ARHGEF6Q15052 776 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 PPP1R2P3Q6NXS1 205 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 TEKT1Q969V4 418 aa17.55■□□□□ 0.4
GNE-202ENST00000396594 NEURL1BA8MQ27 555 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 IL6STP40189 918 aaPredicted RBP17.54■□□□□ 0.4
GNE-202ENST00000396594 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 USP21Q9UK80 565 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 CETN3O15182 167 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 MIS12Q9H081 205 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
GNE-202ENST00000396594 IVNS1ABPQ9Y6Y0 642 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 USP6P35125 1406 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
GNE-202ENST00000396594 CCDC129Q6ZRS4 1044 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 AOPEPQ8N6M6 819 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 SWAP70Q9UH65 585 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 DNM2P50570 870 aa17.54■□□□□ 0.4
GNE-202ENST00000396594 N4BP1O75113 896 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 LIG1P18858 919 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 PPP2R5EQ16537 467 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 SEL1L2Q5TEA6 688 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 CCDC84Q86UT8 332 aaPredicted RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 MPNDQ8N594 471 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 TRIML1Q8N9V2 468 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 CCDC113Q9H0I3 377 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 MRVI1Q9Y6F6 885 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 SLU7O95391 586 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 HCLS1P14317 486 aaPredicted RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 LAD1O00515 517 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 HSPA4P34932 840 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 CCT6AP40227 531 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 VAV2P52735 878 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 PRPF4BQ13523 1007 aaKnown RBP17.53■□□□□ 0.4
GNE-202ENST00000396594 FNBP1Q96RU3 617 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 CLSTN2Q9H4D0 955 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 ZKSCAN5Q9Y2L8 839 aa17.53■□□□□ 0.4
GNE-202ENST00000396594 LAMC1P11047 1609 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 MACROD2A1Z1Q3 448 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
GNE-202ENST00000396594 P4HA1P13674 534 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 UBXN1Q04323 297 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 UBE3CQ15386 1083 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 TTC38Q5R3I4 469 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 ERVV-1B6SEH8 477 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 AKR1B15C9JRZ8 316 aaPredicted RBP17.52■□□□□ 0.4
GNE-202ENST00000396594 FOSP01100 380 aaPredicted RBP17.52■□□□□ 0.4
GNE-202ENST00000396594 GNPTABQ3T906 1256 aa17.52■□□□□ 0.4
GNE-202ENST00000396594 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms