RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MTMR14Q8NCE2 650 aa16.21■□□□□ 0.19
VAPB-202ENST00000395802 ADCK5Q3MIX3 580 aa16.2■□□□□ 0.18
VAPB-202ENST00000395802 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
VAPB-202ENST00000395802 CTR9Q6PD62 1173 aa16.2■□□□□ 0.18
VAPB-202ENST00000395802 DHX32Q7L7V1 743 aaKnown RBP16.2■□□□□ 0.18
VAPB-202ENST00000395802 PDRG1Q9NUG6 133 aa16.2■□□□□ 0.18
VAPB-202ENST00000395802 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
VAPB-202ENST00000395802 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
VAPB-202ENST00000395802 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
VAPB-202ENST00000395802 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 USP17L12C9JPN9 530 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 USP17L21D6R901 530 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 PDE4BQ07343 736 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 CDC42EP5Q6NZY7 148 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 STAG1Q8WVM7 1258 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 MKRN1Q9UHC7 482 aaKnown RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 FLT1P17948 1338 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 MCM5P33992 734 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 FGD1P98174 961 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 IDI2Q9BXS1 227 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 ALDH8A1Q9H2A2 487 aaPredicted RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 RNF181Q9P0P0 153 aa16.19■□□□□ 0.18
VAPB-202ENST00000395802 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
VAPB-202ENST00000395802 UTRNP46939 3433 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 PRELPP51888 382 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 MAPKAPK5Q8IW41 473 aa16.18■□□□□ 0.18
VAPB-202ENST00000395802 DHX36Q9H2U1 1008 aaKnown RBP16.18■□□□□ 0.18
VAPB-202ENST00000395802 H7C1D1 291 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 K7ELQ4 463 aaPredicted RBP16.17■□□□□ 0.18
VAPB-202ENST00000395802 ZNF280AP59817 542 aaPredicted RBP16.17■□□□□ 0.18
VAPB-202ENST00000395802 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 ESR2Q92731 530 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 MYOZ2Q9NPC6 264 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 LAMA4Q16363 1823 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 WDHD1O75717 1129 aaPredicted RBP16.17■□□□□ 0.18
VAPB-202ENST00000395802 CD2BP2O95400 341 aaKnown RBP16.17■□□□□ 0.18
VAPB-202ENST00000395802 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
VAPB-202ENST00000395802 C12orf60Q5U649 245 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
VAPB-202ENST00000395802 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 ENTPD3O75355 529 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
VAPB-202ENST00000395802 PICALMQ13492 652 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 C9orf131Q5VYM1 1079 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 PRMT6Q96LA8 375 aaPredicted RBP16.16■□□□□ 0.18
VAPB-202ENST00000395802 TTC14Q96N46 770 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
VAPB-202ENST00000395802 SBF1O95248 1867 aa16.16■□□□□ 0.18
VAPB-202ENST00000395802 FGRP09769 529 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 CTDSPL2Q05D32 466 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 ZSCAN31Q96LW9 406 aaPredicted RBP16.15■□□□□ 0.18
VAPB-202ENST00000395802 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
VAPB-202ENST00000395802 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 HSP90AA1P07900 732 aaKnown RBP16.15■□□□□ 0.18
VAPB-202ENST00000395802 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
VAPB-202ENST00000395802 TNFAIP1Q13829 316 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 TDRD3Q9H7E2 651 aaKnown RBP16.15■□□□□ 0.18
VAPB-202ENST00000395802 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
VAPB-202ENST00000395802 ROBO3Q96MS0 1386 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 ERICH2A1L162 156 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 ORC4O43929 436 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 TNNI2P48788 182 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 AK2P54819 239 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
VAPB-202ENST00000395802 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
VAPB-202ENST00000395802 MKNK2Q9HBH9 465 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
VAPB-202ENST00000395802 WNT10BO00744 389 aa16.13■□□□□ 0.17
VAPB-202ENST00000395802 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
VAPB-202ENST00000395802 SH2B1Q9NRF2 756 aaPredicted RBP16.13■□□□□ 0.17
VAPB-202ENST00000395802 GPRC5DQ9NZD1 345 aa16.13■□□□□ 0.17
VAPB-202ENST00000395802 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
VAPB-202ENST00000395802 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
VAPB-202ENST00000395802 FOCADQ5VW36 1801 aa16.13■□□□□ 0.17
VAPB-202ENST00000395802 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
VAPB-202ENST00000395802 PRC1O43663 620 aa16.12■□□□□ 0.17
VAPB-202ENST00000395802 CCDC178Q5BJE1 867 aa16.12■□□□□ 0.17
VAPB-202ENST00000395802 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms