RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZMYM6O95789 1325 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 GPAA1O43292 621 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 EPS15P42566 896 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 HDLBPQ00341 1268 aaKnown RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 SKOR2Q2VWA4 1001 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 CFAP100Q494V2 611 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 HHIPL2Q6UWX4 724 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 MYOZ2Q9NPC6 264 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 DAGLAQ9Y4D2 1042 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 PCDHAC2Q9Y5I4 1007 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 GOLGA6L22H0YM25 854 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 ZNF280AP59817 542 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 TMED8Q6PL24 325 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 SAMD7Q7Z3H4 446 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 NOL10Q9BSC4 688 aaKnown RBP17.86■□□□□ 0.45
SCAF11-204ENST00000395454 MRIQ9BWK5 157 aa17.86■□□□□ 0.45
SCAF11-204ENST00000395454 GAKO14976 1311 aa17.85■□□□□ 0.45
SCAF11-204ENST00000395454 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
SCAF11-204ENST00000395454 EGFRP00533 1210 aa17.85■□□□□ 0.45
SCAF11-204ENST00000395454 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
SCAF11-204ENST00000395454 BTDP43251 543 aa17.85■□□□□ 0.45
SCAF11-204ENST00000395454 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
SCAF11-204ENST00000395454 DLGAP5Q15398 846 aa17.85■□□□□ 0.45
SCAF11-204ENST00000395454 ZNF526Q8TF50 670 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-204ENST00000395454 FAM163AQ96GL9 167 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-204ENST00000395454 ZDHHC15Q96MV8 337 aa17.85■□□□□ 0.45
SCAF11-204ENST00000395454 MMP14P50281 582 aa17.84■□□□□ 0.45
SCAF11-204ENST00000395454 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
SCAF11-204ENST00000395454 DHX32Q7L7V1 743 aaKnown RBP17.84■□□□□ 0.45
SCAF11-204ENST00000395454 AIDAQ96BJ3 306 aa17.84■□□□□ 0.45
SCAF11-204ENST00000395454 MAGEB6P1A0A0J9YX57 407 aa17.84■□□□□ 0.45
SCAF11-204ENST00000395454 E7EWF7 191 aa17.84■□□□□ 0.45
SCAF11-204ENST00000395454 BAG3O95817 575 aa17.84■□□□□ 0.45
SCAF11-204ENST00000395454 GPR75-ASB3A0A0A6YYF3 556 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 MBD4O95243 580 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 FGAP02671 866 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 KIF4BQ2VIQ3 1234 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 APOBEC3HQ6NTF7 200 aaKnown RBP17.83■□□□□ 0.44
SCAF11-204ENST00000395454 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.44
SCAF11-204ENST00000395454 HACL1Q9UJ83 578 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
SCAF11-204ENST00000395454 IQCA1LA6NCM1 817 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 SPDYE2BA6NHP3 402 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 WNT10BO00744 389 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 SPDYE6P0CI01 402 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 DYNLL1P63167 89 aaKnown RBP17.82■□□□□ 0.44
SCAF11-204ENST00000395454 ALX1Q15699 326 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 LARP6Q9BRS8 491 aaKnown RBP17.82■□□□□ 0.44
SCAF11-204ENST00000395454 WDR19Q8NEZ3 1342 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 EVCP57679 992 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 IMMTQ16891 758 aaKnown RBP17.82■□□□□ 0.44
SCAF11-204ENST00000395454 NBPF9Q3BBW0 867 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 LCORLQ8N3X6 602 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 TRPM4Q8TD43 1214 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
SCAF11-204ENST00000395454 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 ADARB2Q9NS39 739 aaKnown RBP17.82■□□□□ 0.44
SCAF11-204ENST00000395454 SCN4AP35499 1836 aa17.82■□□□□ 0.44
SCAF11-204ENST00000395454 MYO1BO43795 1136 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 MTMR14Q8NCE2 650 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 GTF3C6Q969F1 213 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
SCAF11-204ENST00000395454 TDRD3Q9H7E2 651 aaKnown RBP17.81■□□□□ 0.44
SCAF11-204ENST00000395454 LMBRD1Q9NUN5 540 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 WDR90Q96KV7 1748 aa17.81■□□□□ 0.44
SCAF11-204ENST00000395454 SYT1P21579 422 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 EPHX2P34913 555 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 KLHL40Q2TBA0 621 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 Q6ZUG5 572 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 SH3RF3Q8TEJ3 882 aaPredicted RBP17.8■□□□□ 0.44
SCAF11-204ENST00000395454 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 POTECB2RU33 542 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 STX6O43752 255 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 PLCG2P16885 1265 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 PPP4CP60510 307 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 CDC42EP5Q6NZY7 148 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 RRAGCQ9HB90 399 aa17.8■□□□□ 0.44
SCAF11-204ENST00000395454 CLRN2A0PK11 232 aa17.79■□□□□ 0.44
SCAF11-204ENST00000395454 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
SCAF11-204ENST00000395454 GJB2P29033 226 aa17.79■□□□□ 0.44
SCAF11-204ENST00000395454 RHBDL3P58872 404 aa17.79■□□□□ 0.44
SCAF11-204ENST00000395454 CERS3Q8IU89 383 aa17.79■□□□□ 0.44
SCAF11-204ENST00000395454 TCHHQ07283 1943 aa17.79■□□□□ 0.44
SCAF11-204ENST00000395454 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 CACNB3P54284 484 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 MCTP1Q6DN14 999 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 ZBED3Q96IU2 234 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 TAF1DQ9H5J8 278 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 VEZTQ9HBM0 779 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 PFKFB2O60825 505 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms