RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 ZKSCAN2Q63HK3 967 aa16.76■□□□□ 0.27
SCAF11-203ENST00000395453 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
SCAF11-203ENST00000395453 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
SCAF11-203ENST00000395453 DAGLAQ9Y4D2 1042 aa16.76■□□□□ 0.27
SCAF11-203ENST00000395453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.76■□□□□ 0.27
SCAF11-203ENST00000395453 PDS5AQ29RF7 1337 aaKnown RBP16.76■□□□□ 0.27
SCAF11-203ENST00000395453 COL6A3P12111 3177 aa16.76■□□□□ 0.27
SCAF11-203ENST00000395453 BTBD19C9JJ37 291 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 LDHBP07195 334 aaKnown RBP16.75■□□□□ 0.27
SCAF11-203ENST00000395453 HOXD10P28358 340 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 MTFR1Q15390 333 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 DIXDC1Q155Q3 683 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 ERO1BQ86YB8 467 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
SCAF11-203ENST00000395453 RPAP1Q9BWH6 1393 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-203ENST00000395453 PNMA6EA0A0J9YXQ4 647 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 A0A1B0GUL7 405 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 CDC42EP5Q6NZY7 148 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 HOOK2Q96ED9 719 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 PRO3102Q9H379 93 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 SRRDQ9UH36 339 aa16.74■□□□□ 0.27
SCAF11-203ENST00000395453 GJB1P08034 283 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 GRK4P32298 578 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 PSMC4P43686 418 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 GJA8P48165 433 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
SCAF11-203ENST00000395453 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 FAM151AQ8WW52 585 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
SCAF11-203ENST00000395453 IRF6O14896 467 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 PPIL2Q13356 520 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
SCAF11-203ENST00000395453 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 FAM163AQ96GL9 167 aaPredicted RBP16.72■□□□□ 0.27
SCAF11-203ENST00000395453 WRNIP1Q96S55 665 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 CUL9Q8IWT3 2517 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 ZSWIM8A7E2V4 1837 aa16.72■□□□□ 0.27
SCAF11-203ENST00000395453 A0A1W2PPC1 479 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 NFIAQ12857 509 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
SCAF11-203ENST00000395453 GAKO14976 1311 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.27
SCAF11-203ENST00000395453 ECM2O94769 699 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 FMNL1O95466 1100 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 CCL5P13501 91 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 OSBPP22059 807 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 UBXN2AP68543 259 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 ATP8B2P98198 1209 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 RNF208Q9H0X6 261 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 USP40Q9NVE5 1235 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 CPA4Q9UI42 421 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 ZNF112Q9UJU3 913 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 RLBP1P12271 317 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 CTGFP29279 349 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 CLCN6P51797 869 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 PPATQ06203 517 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 TCP10Q12799 353 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-203ENST00000395453 MIGA2Q7L4E1 593 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 NEUROD6Q96NK8 337 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
SCAF11-203ENST00000395453 MYPNQ86TC9 1320 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
SCAF11-203ENST00000395453 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 ZNF341Q9BYN7 854 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 HMG20BQ9P0W2 317 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
SCAF11-203ENST00000395453 PDHXO00330 501 aa16.68■□□□□ 0.26
SCAF11-203ENST00000395453 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-203ENST00000395453 SLF2Q8IX21 1173 aa16.68■□□□□ 0.26
SCAF11-203ENST00000395453 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
SCAF11-203ENST00000395453 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
SCAF11-203ENST00000395453 GPR108Q9NPR9 543 aa16.68■□□□□ 0.26
SCAF11-203ENST00000395453 AK9Q5TCS8 1911 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 RFX7Q2KHR2 1363 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 EVI5O60447 810 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 ENTPD3O75355 529 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 CD44P16070 742 aaKnown RBP16.67■□□□□ 0.26
SCAF11-203ENST00000395453 CAPN2P17655 700 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 INPP5BP32019 993 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 MECOMQ03112 1051 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 DZIP1Q86YF9 867 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms