RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CRY2Q49AN0 593 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 CAVIN4Q5BKX8 364 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 SPRYD7Q5W111 196 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 DEFB132Q7Z7B7 95 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 FLAD1Q8NFF5 587 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 IL17RAQ96F46 866 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 FAM84BQ96KN1 310 aaPredicted RBP8.27□□□□□ -1.09
RTN4-205ENST00000394609 CAMKK2Q96RR4 588 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.27□□□□□ -1.09
RTN4-205ENST00000394609 ANKRD2Q9GZV1 360 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 WWC3Q9ULE0 1092 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 UBR3Q6ZT12 1888 aa8.27□□□□□ -1.09
RTN4-205ENST00000394609 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 HSPD1P10809 573 aaKnown RBP8.26□□□□□ -1.09
RTN4-205ENST00000394609 MCM4P33991 863 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 ADD2P35612 726 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 RNF20Q5VTR2 975 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 TXNRD3Q86VQ6 643 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 APPBP2Q92624 585 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 KCNB2Q92953 911 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 TMX3Q96JJ7 454 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 CHMP5Q9NZZ3 219 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 TAF1P21675 1872 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 COL24A1Q17RW2 1714 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 ZNF804BA4D1E1 1349 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 ZNF532Q9HCE3 1301 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 S1PR4O95977 384 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 PDE6AP16499 860 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 PKDCCQ504Y2 493 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 TTLL5Q6EMB2 1281 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 ZSCAN25Q6NSZ9 544 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 MAGEB6Q8N7X4 407 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 RBM17Q96I25 401 aaKnown RBP8.26□□□□□ -1.09
RTN4-205ENST00000394609 GPR101Q96P66 508 aaPredicted RBP8.26□□□□□ -1.09
RTN4-205ENST00000394609 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 GNL3LQ9NVN8 582 aaKnown RBP8.26□□□□□ -1.09
RTN4-205ENST00000394609 LRP2BPQ9P2M1 347 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 ABCF2Q9UG63 623 aa8.26□□□□□ -1.09
RTN4-205ENST00000394609 NSFL1CQ9UNZ2 370 aaKnown RBP8.26□□□□□ -1.09
RTN4-205ENST00000394609 LAMB2P55268 1798 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 FOXP2O15409 715 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 GPAA1O43292 621 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 CYP21A2P08686 494 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 SLC10A3P09131 477 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 HIBADHP31937 336 aaKnown RBP8.25□□□□□ -1.09
RTN4-205ENST00000394609 DDIT3P35638 169 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 AK2P54819 239 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 GPSM2P81274 684 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 MAP3K12Q12852 859 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
RTN4-205ENST00000394609 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 RUFY3Q7L099 469 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 FBXO33Q7Z6M2 555 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 ZGPATQ8N5A5 531 aaKnown RBP8.25□□□□□ -1.09
RTN4-205ENST00000394609 TCEANC2Q96MN5 208 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 TTC14Q96N46 770 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 JAG2Q9Y219 1238 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 CYP46A1Q9Y6A2 500 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
RTN4-205ENST00000394609 TNRC6CQ9HCJ0 1690 aaKnown RBP8.25□□□□□ -1.09
RTN4-205ENST00000394609 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 MCM2P49736 904 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 UBE3CQ15386 1083 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 SKOR2Q2VWA4 1001 aaPredicted RBP8.24□□□□□ -1.09
RTN4-205ENST00000394609 BRIP1Q9BX63 1249 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 TM6SF1Q9BZW5 370 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 PDGFDQ9GZP0 370 aaPredicted RBP8.24□□□□□ -1.09
RTN4-205ENST00000394609 STK32BQ9NY57 414 aa8.24□□□□□ -1.09
RTN4-205ENST00000394609 KLRG2A4D1S0 409 aaPredicted RBP8.23□□□□□ -1.09
RTN4-205ENST00000394609 ESPNB1AK53 854 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 SEMA3EO15041 775 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 BBOX1O75936 387 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 FGAP02671 866 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 APPP05067 770 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 PSMA5P28066 241 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 HOXA10P31260 410 aaPredicted RBP8.23□□□□□ -1.09
RTN4-205ENST00000394609 HAND2P61296 217 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 CHAF1AQ13111 956 aaPredicted RBP8.23□□□□□ -1.09
RTN4-205ENST00000394609 TSGA10IPQ3SY00 556 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 BLOC1S2Q6QNY1 142 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 PDCL3Q9H2J4 239 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 RAI14Q9P0K7 980 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 SPEF2Q9C093 1822 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 XDHP47989 1333 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 DTNBO60941 627 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 UFL1O94874 794 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 MBD4O95243 580 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 SRGNP10124 158 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 RPS6KB1P23443 525 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 BAG6P46379 1132 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 ZNF697Q5TEC3 545 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 OLFM4Q6UX06 510 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 STOX1Q6ZVD7 989 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 MIGA1Q8NAN2 632 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
RTN4-205ENST00000394609 NAP1L5Q96NT1 182 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms