RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PRDM11Q9NQV5 511 aa21.56■■□□□ 1.04
HOXC6-202ENST00000394331 A0A087WWV3 80 aa21.56■■□□□ 1.04
HOXC6-202ENST00000394331 KCNA4P22459 653 aa21.56■■□□□ 1.04
HOXC6-202ENST00000394331 NEDD4P46934 1319 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 EYA2O00167 538 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 GOLIM4O00461 696 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 JAK2O60674 1132 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 CUTAO60888 179 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 NKX1-1Q15270 411 aaPredicted RBP21.55■■□□□ 1.04
HOXC6-202ENST00000394331 DHX58Q96C10 678 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 VIPAS39Q9H9C1 493 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 STX10O60499 249 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 CIAO1O76071 339 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 ADALQ6DHV7 355 aa21.55■■□□□ 1.04
HOXC6-202ENST00000394331 ERLIN2O94905 339 aa21.54■■□□□ 1.04
HOXC6-202ENST00000394331 DHX32Q7L7V1 743 aaKnown RBP21.54■■□□□ 1.04
HOXC6-202ENST00000394331 STAG1Q8WVM7 1258 aa21.54■■□□□ 1.04
HOXC6-202ENST00000394331 SDF4Q9BRK5 362 aa21.54■■□□□ 1.04
HOXC6-202ENST00000394331 A1BGP04217 495 aa21.54■■□□□ 1.04
HOXC6-202ENST00000394331 AARSP49588 968 aaKnown RBP eCLIP21.54■■□□□ 1.041e-6■■■■■ 36.1
HOXC6-202ENST00000394331 USP28Q96RU2 1077 aa21.54■■□□□ 1.04
HOXC6-202ENST00000394331 CHGBP05060 677 aa21.53■■□□□ 1.04
HOXC6-202ENST00000394331 TIMM10P62072 90 aa21.53■■□□□ 1.04
HOXC6-202ENST00000394331 ZMYM1Q5SVZ6 1142 aa21.53■■□□□ 1.04
HOXC6-202ENST00000394331 HSD3B7Q9H2F3 369 aa21.53■■□□□ 1.04
HOXC6-202ENST00000394331 N4BP1O75113 896 aaKnown RBP21.53■■□□□ 1.04
HOXC6-202ENST00000394331 MICALL1Q8N3F8 863 aa21.53■■□□□ 1.04
HOXC6-202ENST00000394331 CCDC9Q9Y3X0 531 aaKnown RBP21.53■■□□□ 1.04
HOXC6-202ENST00000394331 CASP8Q14790 479 aa21.52■■□□□ 1.04
HOXC6-202ENST00000394331 C21orf2O43822 256 aa21.52■■□□□ 1.04
HOXC6-202ENST00000394331 ZBTB3Q9H5J0 574 aa21.52■■□□□ 1.04
HOXC6-202ENST00000394331 PFKFB2O60825 505 aa21.52■■□□□ 1.03
HOXC6-202ENST00000394331 UBASH3AP57075 661 aa21.52■■□□□ 1.03
HOXC6-202ENST00000394331 CTCFLQ8NI51 663 aaPredicted RBP21.52■■□□□ 1.03
HOXC6-202ENST00000394331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.52■■□□□ 1.03
HOXC6-202ENST00000394331 SHOX2O60902 331 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 TOP1P11387 765 aaKnown RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 ME1P48163 572 aa21.51■■□□□ 1.03
HOXC6-202ENST00000394331 TBX2Q13207 712 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 FAM204AQ9H8W3 233 aa21.51■■□□□ 1.03
HOXC6-202ENST00000394331 ABCB6Q9NP58 842 aa21.51■■□□□ 1.03
HOXC6-202ENST00000394331 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
HOXC6-202ENST00000394331 IL2RBP14784 551 aa21.51■■□□□ 1.03
HOXC6-202ENST00000394331 ERCC4Q92889 916 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 BAG1Q99933 345 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-202ENST00000394331 CEBPZQ03701 1054 aaKnown RBP21.5■■□□□ 1.03
HOXC6-202ENST00000394331 STOX1Q6ZVD7 989 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 CDC23Q9UJX2 597 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 RNF113AO15541 343 aaKnown RBP21.5■■□□□ 1.03
HOXC6-202ENST00000394331 HNRNPH1P31943 449 aaKnown RBP21.5■■□□□ 1.03
HOXC6-202ENST00000394331 SCRN1Q12765 414 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 AFAP1L1Q8TED9 768 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 KAT2BQ92831 832 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 PNKPQ96T60 521 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 RTEL1Q9NZ71 1219 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
HOXC6-202ENST00000394331 ATXN2Q99700 1313 aaKnown RBP21.5■■□□□ 1.03
HOXC6-202ENST00000394331 LRRC24Q50LG9 513 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 KCPQ6ZWJ8 1503 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 PCDHA7Q9UN72 937 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 SLC3A2P08195 630 aaKnown RBP21.49■■□□□ 1.03
HOXC6-202ENST00000394331 TDO2P48775 406 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 CNPY4Q8N129 248 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 AGXT2Q9BYV1 514 aa21.49■■□□□ 1.03
HOXC6-202ENST00000394331 HSPD1P10809 573 aaKnown RBP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 LMOD1P29536 600 aaPredicted RBP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 MNAT1P51948 309 aa21.48■■□□□ 1.03
HOXC6-202ENST00000394331 EXOSC10Q01780 885 aaKnown RBP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 CCDC12Q8WUD4 166 aaPredicted RBP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 ISCA1Q9BUE6 129 aa21.48■■□□□ 1.03
HOXC6-202ENST00000394331 CCDC57Q2TAC2 916 aa21.48■■□□□ 1.03
HOXC6-202ENST00000394331 CCDC102AQ96A19 550 aa21.48■■□□□ 1.03
HOXC6-202ENST00000394331 ZNF594Q96JF6 807 aaPredicted RBP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 LRRC2Q9BYS8 371 aa21.48■■□□□ 1.03
HOXC6-202ENST00000394331 FTOQ9C0B1 505 aaKnown RBP eCLIP21.48■■□□□ 1.03
HOXC6-202ENST00000394331 CCDC189A1A4V9 331 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 EXOC5O00471 708 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 WDHD1O75717 1129 aaPredicted RBP21.47■■□□□ 1.03
HOXC6-202ENST00000394331 PRPF6O94906 941 aaKnown RBP21.47■■□□□ 1.03
HOXC6-202ENST00000394331 MYL5Q02045 173 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 WDR93Q6P2C0 686 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 FAM177A1Q8N128 213 aaPredicted RBP21.47■■□□□ 1.03
HOXC6-202ENST00000394331 NDUFA8P51970 172 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 DDR1Q08345 913 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 KCNV1Q6PIU1 500 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 TNS2Q63HR2 1409 aa21.47■■□□□ 1.03
HOXC6-202ENST00000394331 COL5A2P05997 1499 aaPredicted RBP21.47■■□□□ 1.03
HOXC6-202ENST00000394331 NUP188Q5SRE5 1749 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 SERPINC1P01008 464 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 TCIRG1Q13488 830 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 NSUN7Q8NE18 718 aaKnown RBP21.46■■□□□ 1.03
HOXC6-202ENST00000394331 KCNG1Q9UIX4 513 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 MAST3O60307 1309 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 ATP1A3P13637 1013 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms