RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 CHRNDQ07001 517 aa13.74□□□□□ -0.21
VTI1BP2-201ENST00000394154 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
VTI1BP2-201ENST00000394154 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.74□□□□□ -0.21
VTI1BP2-201ENST00000394154 PHAXQ9H814 394 aaKnown RBP13.74□□□□□ -0.21
VTI1BP2-201ENST00000394154 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
VTI1BP2-201ENST00000394154 TNFRSF10AO00220 468 aa13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 TTF2Q9UNY4 1162 aaKnown RBP13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 KCNH4Q9UQ05 1017 aa13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
VTI1BP2-201ENST00000394154 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 ITGA6P23229 1130 aa13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 RAPGEFL1Q9UHV5 662 aa13.72□□□□□ -0.21
VTI1BP2-201ENST00000394154 A0A1B0GUL6 1792 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 F6X3S4 739 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 CRKP46108 304 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 MOGSQ13724 837 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 MFSD14BQ5SR56 506 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 SLC4A10Q6U841 1118 aa13.71□□□□□ -0.21
VTI1BP2-201ENST00000394154 SNAP23O00161 211 aa13.7□□□□□ -0.22
VTI1BP2-201ENST00000394154 CYP2C8P10632 490 aa13.7□□□□□ -0.22
VTI1BP2-201ENST00000394154 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
VTI1BP2-201ENST00000394154 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
VTI1BP2-201ENST00000394154 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
VTI1BP2-201ENST00000394154 TAF5LO75529 589 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 MDM2Q00987 491 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 TJAP1Q5JTD0 557 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 FAM83AQ86UY5 434 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 COA7Q96BR5 231 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 RPAP1Q9BWH6 1393 aaPredicted RBP13.69□□□□□ -0.22
VTI1BP2-201ENST00000394154 PI4KAP2A4QPH2 592 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 HMGCRP04035 888 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 INPP5BP32019 993 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 GPAT2Q6NUI2 795 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 PI4KAP1Q8N8J0 262 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 PLA2G12BQ9BX93 195 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 OGDHLQ9ULD0 1010 aa13.68□□□□□ -0.22
VTI1BP2-201ENST00000394154 PFASO15067 1338 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 TMEM265A0A087WTH1 108 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 CACNB3P54284 484 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 NEXNQ0ZGT2 675 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 UBE3BQ7Z3V4 1068 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
VTI1BP2-201ENST00000394154 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 H7C1W4 665 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 CXCL11O14625 94 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 CSF1RP07333 972 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 FASTKD5Q7L8L6 764 aaKnown RBP13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 TDRD7Q8NHU6 1098 aaKnown RBP13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 MYLIPQ8WY64 445 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 RWDD1Q9H446 243 aaPredicted RBP13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
VTI1BP2-201ENST00000394154 DOCK3Q8IZD9 2030 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 NEURL1BA8MQ27 555 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 GNAI3P08754 354 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 FOSL2P15408 326 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 SMCR8Q8TEV9 937 aaPredicted RBP13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 ZNF112Q9UJU3 913 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 PCDHB15Q9Y5E8 787 aa13.65□□□□□ -0.22
VTI1BP2-201ENST00000394154 CDH23Q9H251 3354 aa13.65□□□□□ -0.23
VTI1BP2-201ENST00000394154 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 COL6A1P12109 1028 aa13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 MAP3K12Q12852 859 aa13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 TEKT1Q969V4 418 aa13.64□□□□□ -0.23
VTI1BP2-201ENST00000394154 A0A0G2JLL6 359 aaPredicted RBP13.63□□□□□ -0.23
VTI1BP2-201ENST00000394154 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
VTI1BP2-201ENST00000394154 PRRT2Q7Z6L0 340 aaPredicted RBP13.63□□□□□ -0.23
VTI1BP2-201ENST00000394154 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
VTI1BP2-201ENST00000394154 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
VTI1BP2-201ENST00000394154 GNAI2P04899 355 aa13.62□□□□□ -0.23
VTI1BP2-201ENST00000394154 HIBADHP31937 336 aaKnown RBP13.62□□□□□ -0.23
VTI1BP2-201ENST00000394154 ZDHHC15Q96MV8 337 aa13.62□□□□□ -0.23
VTI1BP2-201ENST00000394154 MEIS3Q99687 375 aa13.62□□□□□ -0.23
VTI1BP2-201ENST00000394154 MAST2Q6P0Q8 1798 aa13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 UBTFL1P0CB47 393 aaPredicted RBP13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 GADL1Q6ZQY3 521 aa13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms