RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 TRIM58Q8NG06 486 aa12.91□□□□□ -0.34
LAMB1-203ENST00000393560 ARHGAP45Q92619 1136 aa12.91□□□□□ -0.34
LAMB1-203ENST00000393560 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.344e-13■■□□□ 14.3
LAMB1-203ENST00000393560 FBXO9Q9UK97 447 aaPredicted RBP12.91□□□□□ -0.34
LAMB1-203ENST00000393560 PARP1P09874 1014 aaKnown RBP12.9□□□□□ -0.34
LAMB1-203ENST00000393560 TTC30BQ8N4P2 665 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 UTP14AQ9BVJ6 771 aaKnown RBP12.9□□□□□ -0.34
LAMB1-203ENST00000393560 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 SUGCTQ9HAC7 445 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 ST18O60284 1047 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 DTNBO60941 627 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 SMIM24O75264 130 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
LAMB1-203ENST00000393560 HMOX1P09601 288 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 SMTNP53814 917 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 PPP1R13BQ96KQ4 1090 aa12.9□□□□□ -0.34
LAMB1-203ENST00000393560 LGR5O75473 907 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 MYOCDQ8IZQ8 938 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 BCAS4Q8TDM0 211 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 IRF2BPLQ9H1B7 796 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 RASSF9O75901 435 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 SLC40A1Q9NP59 571 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 MKS1Q9NXB0 559 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 B4DLN1 442 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 HOXA10P31260 410 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
LAMB1-203ENST00000393560 WHAMMQ8TF30 809 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 HOOK2Q96ED9 719 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 CBX8Q9HC52 389 aa12.89□□□□□ -0.35
LAMB1-203ENST00000393560 POLR3AO14802 1390 aaPredicted RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 CREB3O43889 395 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 PEX14O75381 377 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 UPP2O95045 317 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 ALOX15P16050 662 aaPredicted RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 NANOGNBQ7Z5D8 188 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 EHD4Q9H223 541 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 TFIP11Q9UBB9 837 aaKnown RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 LSM1O15116 133 aaKnown RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 RNF40O75150 1001 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 NSUN2Q08J23 767 aaKnown RBP eCLIP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
LAMB1-203ENST00000393560 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
LAMB1-203ENST00000393560 ERLIN1O75477 346 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 CUL4BQ13620 913 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 FXNQ16595 210 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 PPP1R15BQ5SWA1 713 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC150Q8NCX0 1101 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
LAMB1-203ENST00000393560 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 NDUFB5O43674 189 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 MARCH6O60337 910 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
LAMB1-203ENST00000393560 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
LAMB1-203ENST00000393560 ROBO2Q9HCK4 1378 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 DESP17661 470 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 SLC8A1P32418 973 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 UBE2HP62256 183 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 BRD3Q15059 726 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 KIAA0753Q2KHM9 967 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 FAAH2Q6GMR7 532 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 PHF23Q9BUL5 403 aaPredicted RBP12.86□□□□□ -0.35
LAMB1-203ENST00000393560 GALNT8Q9NY28 637 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 ABCF2Q9UG63 623 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
LAMB1-203ENST00000393560 BARX2Q9UMQ3 279 aaPredicted RBP12.86□□□□□ -0.35
LAMB1-203ENST00000393560 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 ETF1P62495 437 aaKnown RBP12.86□□□□□ -0.35
LAMB1-203ENST00000393560 MYO1EQ12965 1108 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
LAMB1-203ENST00000393560 SPO11Q9Y5K1 396 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms