RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SPATA5Q8NB90 893 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 KIAA0100Q14667 2235 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 DDTLA6NHG4 134 aaPredicted RBP22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 MAP3K10Q02779 954 aa22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 ERICH6Q7L0X2 663 aa22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 EFCC1Q9HA90 598 aa22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 KCNH4Q9UQ05 1017 aa22.52■■□□□ 1.2
PDLIM7-205ENST00000393551 NSUN4Q96CB9 384 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-205ENST00000393551 ZCCHC17Q9NP64 241 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-205ENST00000393551 MYO5AQ9Y4I1 1855 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-205ENST00000393551 TLR2O60603 784 aa22.5■■□□□ 1.19
PDLIM7-205ENST00000393551 GORABQ5T7V8 394 aa22.5■■□□□ 1.19
PDLIM7-205ENST00000393551 SLF2Q8IX21 1173 aa22.5■■□□□ 1.19
PDLIM7-205ENST00000393551 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
PDLIM7-205ENST00000393551 PICALMQ13492 652 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 TNNI3KQ59H18 835 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 DBNDD2Q9BQY9 259 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 ARHGAP39Q9C0H5 1083 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 GPR108Q9NPR9 543 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 FPGT-TNNI3KV9GXZ4 949 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 PHIPQ8WWQ0 1821 aa22.49■■□□□ 1.19
PDLIM7-205ENST00000393551 ITPRIPQ8IWB1 547 aa22.48■■□□□ 1.19
PDLIM7-205ENST00000393551 FTSJ3Q8IY81 847 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-205ENST00000393551 PTPRFP10586 1907 aa22.48■■□□□ 1.19
PDLIM7-205ENST00000393551 SURF6O75683 361 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 ANKRD23Q86SG2 305 aa22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 ZSCAN29Q8IWY8 852 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 ARMC5Q96C12 935 aa22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 SNRKQ9NRH2 765 aa22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 NOP58Q9Y2X3 529 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 ADGRA2Q96PE1 1338 aa22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 RBBP6Q7Z6E9 1792 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-205ENST00000393551 DOCK1Q14185 1865 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 POTEFA5A3E0 1075 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 UQCRFS1P1P0C7P4 283 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 GPAT2Q6NUI2 795 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 C17orf99Q6UX52 265 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 SCYL3Q8IZE3 742 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 RAI14Q9P0K7 980 aa22.46■■□□□ 1.19
PDLIM7-205ENST00000393551 PDHXO00330 501 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 NPM3O75607 178 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 PTPRAP18433 802 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 CTGFP29279 349 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 LACTBP83111 547 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 PANK1Q8TE04 598 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 PTCH2Q9Y6C5 1203 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 CDK5RAP2Q96SN8 1893 aa22.45■■□□□ 1.18
PDLIM7-205ENST00000393551 CYP2E1P05181 493 aaPredicted RBP22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 TLR7Q9NYK1 1049 aaKnown RBP22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 CPA4Q9UI42 421 aa22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 DBNLQ9UJU6 430 aaKnown RBP22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 AFG3L2Q9Y4W6 797 aa22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 ZHX2Q9Y6X8 837 aa22.44■■□□□ 1.18
PDLIM7-205ENST00000393551 SIPA1L1O43166 1804 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 FAM196BA6NMK8 535 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 CXCL11O14625 94 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 LDHCP07864 332 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 GSTO1P78417 241 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 TTC39AQ5SRH9 613 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 CEP85Q6P2H3 762 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 ADGRA1Q86SQ6 560 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
PDLIM7-205ENST00000393551 TBC1D12O60347 775 aa22.42■■□□□ 1.18
PDLIM7-205ENST00000393551 CTNND1O60716 968 aaKnown RBP22.42■■□□□ 1.18
PDLIM7-205ENST00000393551 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-205ENST00000393551 EAF2Q96CJ1 260 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-205ENST00000393551 ZNF512BQ96KM6 892 aaPredicted RBP22.42■■□□□ 1.18
PDLIM7-205ENST00000393551 COL2A1P02458 1487 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 A0A0G2JLL6 359 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 RRP1BQ14684 758 aaKnown RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 CCDC158Q5M9N0 1113 aa22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 PRRT2Q7Z6L0 340 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 SH3RF3Q8TEJ3 882 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 ZNF333Q96JL9 665 aa22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 OSBPL5Q9H0X9 879 aaPredicted RBP22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 PICK1Q9NRD5 415 aa22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 FOCADQ5VW36 1801 aa22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 ATAD5Q96QE3 1844 aa22.41■■□□□ 1.18
PDLIM7-205ENST00000393551 ECM2O94769 699 aaPredicted RBP22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 MAP4K4O95819 1239 aaPredicted RBP22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 CYP2C8P10632 490 aa22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 ZAP70P43403 619 aa22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 CCDC8Q9H0W5 538 aaPredicted RBP22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
PDLIM7-205ENST00000393551 ARHGEF6Q15052 776 aa22.39■■□□□ 1.17
PDLIM7-205ENST00000393551 TEX11Q8IYF3 940 aa22.39■■□□□ 1.17
PDLIM7-205ENST00000393551 TRIM47Q96LD4 638 aa22.39■■□□□ 1.17
PDLIM7-205ENST00000393551 AATFQ9NY61 560 aaKnown RBP eCLIP22.39■■□□□ 1.17
PDLIM7-205ENST00000393551 BCRP11274 1271 aa22.38■■□□□ 1.17
PDLIM7-205ENST00000393551 PPP4CP60510 307 aa22.38■■□□□ 1.17
PDLIM7-205ENST00000393551 NAA16Q6N069 864 aaPredicted RBP22.38■■□□□ 1.17
PDLIM7-205ENST00000393551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.38■■□□□ 1.172e-6■■■■■ 52.9
PDLIM7-205ENST00000393551 MGAMO43451 1857 aa22.38■■□□□ 1.17
PDLIM7-205ENST00000393551 EN2P19622 333 aaPredicted RBP22.37■■□□□ 1.17
PDLIM7-205ENST00000393551 KIF22Q14807 665 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms