RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ADD2P35612 726 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 RBM43Q6ZSC3 357 aaKnown RBP12.5□□□□□ -0.41
BRF1-204ENST00000392557 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 CREBRFQ8IUR6 639 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 ARMT1Q9H993 441 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 NUP98P52948 1817 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 MBD4O95243 580 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 NTSR2O95665 410 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 GYG1P46976 350 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 KIAA1468Q9P260 1216 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 JAG2Q9Y219 1238 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 PLCH1Q4KWH8 1693 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 CDC25BP30305 580 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 MAP3K12Q12852 859 aa12.5□□□□□ -0.41
BRF1-204ENST00000392557 ZPR1O75312 459 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 ZNF202O95125 648 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 UTRNP46939 3433 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 UBASH3AP57075 661 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 CCZ1BP86790 482 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
BRF1-204ENST00000392557 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
BRF1-204ENST00000392557 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 CCNL1Q9UK58 526 aaPredicted RBP12.49□□□□□ -0.41
BRF1-204ENST00000392557 B4E1Z4 1266 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
BRF1-204ENST00000392557 FOXP2O15409 715 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 SARM1Q6SZW1 724 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 KCNG4Q8TDN1 519 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
BRF1-204ENST00000392557 NAPBQ9H115 298 aa12.49□□□□□ -0.41
BRF1-204ENST00000392557 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.48□□□□□ -0.41
BRF1-204ENST00000392557 TRIM29Q14134 588 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 SMARCC2Q8TAQ2 1214 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
BRF1-204ENST00000392557 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 PRKAB2O43741 272 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ATP1A3P13637 1013 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ADD1P35611 737 aaKnown RBP12.48□□□□□ -0.41
BRF1-204ENST00000392557 SYKP43405 635 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 TDO2P48775 406 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 EXOSC10Q01780 885 aaKnown RBP12.48□□□□□ -0.41
BRF1-204ENST00000392557 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 CCDC150Q8NCX0 1101 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
BRF1-204ENST00000392557 SPECC1Q5M775 1068 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
BRF1-204ENST00000392557 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
BRF1-204ENST00000392557 TOP1P11387 765 aaKnown RBP12.47□□□□□ -0.41
BRF1-204ENST00000392557 FANCCQ00597 558 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 CPLX2Q6PUV4 134 aaKnown RBP12.47□□□□□ -0.41
BRF1-204ENST00000392557 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 EP400Q96L91 3159 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 CCDC66A2RUB6 948 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
BRF1-204ENST00000392557 AIFM3Q96NN9 605 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 NOL10Q9BSC4 688 aaKnown RBP12.47□□□□□ -0.41
BRF1-204ENST00000392557 MYL10Q9BUA6 226 aa12.47□□□□□ -0.41
BRF1-204ENST00000392557 RBM6P78332 1123 aaKnown RBP12.46□□□□□ -0.41
BRF1-204ENST00000392557 GABPB1Q06547 395 aaPredicted RBP12.46□□□□□ -0.41
BRF1-204ENST00000392557 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 FMR1NBQ8N0W7 255 aaPredicted RBP12.46□□□□□ -0.41
BRF1-204ENST00000392557 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 MTMR7Q9Y216 660 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 MINDY4BA8MYZ0 360 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 PFKFB1P16118 471 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 ARID4AP29374 1257 aaPredicted RBP12.46□□□□□ -0.41
BRF1-204ENST00000392557 BMS1Q14692 1282 aaKnown RBP12.46□□□□□ -0.41
BRF1-204ENST00000392557 SYCP1Q15431 976 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 VPS72Q15906 364 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 TEX35Q5T0J7 233 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 PHKBQ93100 1093 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 SLC4A4Q9Y6R1 1079 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 SLIT2O94813 1529 aa12.46□□□□□ -0.41
BRF1-204ENST00000392557 FGFR2P21802 821 aa12.46□□□□□ -0.42
BRF1-204ENST00000392557 CYP7A1P22680 504 aa12.46□□□□□ -0.42
BRF1-204ENST00000392557 ANO1Q5XXA6 986 aa12.46□□□□□ -0.42
BRF1-204ENST00000392557 ENGASEQ8NFI3 743 aa12.46□□□□□ -0.42
BRF1-204ENST00000392557 TFCP2L1Q9NZI6 479 aa12.46□□□□□ -0.42
BRF1-204ENST00000392557 RTCBQ9Y3I0 505 aaKnown RBP12.46□□□□□ -0.42
BRF1-204ENST00000392557 PNOCQ13519 176 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 E4F1Q66K89 784 aaPredicted RBP12.45□□□□□ -0.42
BRF1-204ENST00000392557 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 LRRN4CLQ8ND94 238 aa12.45□□□□□ -0.42
BRF1-204ENST00000392557 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms