RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 LAMB1P07942 1786 aa17.04■□□□□ 0.32
CCDC57-204ENST00000392345 HTTP42858 3142 aa17.04■□□□□ 0.32
CCDC57-204ENST00000392345 GSTO1P78417 241 aa17.03■□□□□ 0.32
CCDC57-204ENST00000392345 HSP90AB4PQ58FF6 505 aa17.03■□□□□ 0.32
CCDC57-204ENST00000392345 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-204ENST00000392345 BRI3BPQ8WY22 251 aa17.03■□□□□ 0.32
CCDC57-204ENST00000392345 KIF1BPQ96EK5 621 aa17.03■□□□□ 0.32
CCDC57-204ENST00000392345 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
CCDC57-204ENST00000392345 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
CCDC57-204ENST00000392345 DGKZQ13574 1117 aa17.02■□□□□ 0.32
CCDC57-204ENST00000392345 ZSCAN29Q8IWY8 852 aaPredicted RBP17.02■□□□□ 0.32
CCDC57-204ENST00000392345 SH3RF3Q8TEJ3 882 aaPredicted RBP17.02■□□□□ 0.32
CCDC57-204ENST00000392345 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
CCDC57-204ENST00000392345 HOOK2Q96ED9 719 aa17.02■□□□□ 0.32
CCDC57-204ENST00000392345 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
CCDC57-204ENST00000392345 AATFQ9NY61 560 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC57-204ENST00000392345 ZNF112Q9UJU3 913 aa17.02■□□□□ 0.32
CCDC57-204ENST00000392345 DOCK2Q92608 1830 aa17.01■□□□□ 0.31
CCDC57-204ENST00000392345 TESPA1A2RU30 521 aaPredicted RBP17.01■□□□□ 0.31
CCDC57-204ENST00000392345 LDHCP07864 332 aa17.01■□□□□ 0.31
CCDC57-204ENST00000392345 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
CCDC57-204ENST00000392345 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
CCDC57-204ENST00000392345 CCL15-CCL14A0A0B4J2E2 113 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 FAM196BA6NMK8 535 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 GPR25O00155 361 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
CCDC57-204ENST00000392345 CCL15Q16663 113 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 ERO1BQ86YB8 467 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 CFHR5Q9BXR6 569 aa17■□□□□ 0.31
CCDC57-204ENST00000392345 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 IRF6O14896 467 aa16.99■□□□□ 0.31
CCDC57-204ENST00000392345 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 RAB11FIP3O75154 756 aa16.99■□□□□ 0.31
CCDC57-204ENST00000392345 INHBEP58166 350 aa16.99■□□□□ 0.31
CCDC57-204ENST00000392345 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 CRHR2Q13324 411 aa16.99■□□□□ 0.31
CCDC57-204ENST00000392345 PPIL2Q13356 520 aa16.99■□□□□ 0.31
CCDC57-204ENST00000392345 CLASRPQ8N2M8 674 aaKnown RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.99■□□□□ 0.31
CCDC57-204ENST00000392345 IFIT2P09913 472 aaKnown RBP16.98■□□□□ 0.31
CCDC57-204ENST00000392345 CYP7A1P22680 504 aa16.98■□□□□ 0.31
CCDC57-204ENST00000392345 GTF2A2P52657 109 aa16.98■□□□□ 0.31
CCDC57-204ENST00000392345 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
CCDC57-204ENST00000392345 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
CCDC57-204ENST00000392345 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
CCDC57-204ENST00000392345 MIGA1Q8NAN2 632 aa16.98■□□□□ 0.31
CCDC57-204ENST00000392345 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
CCDC57-204ENST00000392345 COL2A1P02458 1487 aaPredicted RBP16.98■□□□□ 0.31
CCDC57-204ENST00000392345 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
CCDC57-204ENST00000392345 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
CCDC57-204ENST00000392345 PPP4CP60510 307 aa16.97■□□□□ 0.31
CCDC57-204ENST00000392345 MAP3K10Q02779 954 aa16.97■□□□□ 0.31
CCDC57-204ENST00000392345 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
CCDC57-204ENST00000392345 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
CCDC57-204ENST00000392345 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
CCDC57-204ENST00000392345 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
CCDC57-204ENST00000392345 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
CCDC57-204ENST00000392345 FLT1P17948 1338 aa16.96■□□□□ 0.31
CCDC57-204ENST00000392345 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.31
CCDC57-204ENST00000392345 CAP1Q01518 475 aa16.96■□□□□ 0.31
CCDC57-204ENST00000392345 PPATQ06203 517 aa16.96■□□□□ 0.31
CCDC57-204ENST00000392345 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.31
CCDC57-204ENST00000392345 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
CCDC57-204ENST00000392345 CTU1Q7Z7A3 348 aaKnown RBP16.96■□□□□ 0.31
CCDC57-204ENST00000392345 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
CCDC57-204ENST00000392345 CRBNQ96SW2 442 aa16.96■□□□□ 0.31
CCDC57-204ENST00000392345 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 GOLIM4O00461 696 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 FKTNO75072 461 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 BAG3O95817 575 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 SNAPC2Q13487 334 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 SLC4A8Q2Y0W8 1093 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 LRRCC1Q9C099 1032 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 AK9Q5TCS8 1911 aa16.95■□□□□ 0.3
CCDC57-204ENST00000392345 SIPA1L1O43166 1804 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 CENPFP49454 3210 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 CETPP11597 493 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 MOGSQ13724 837 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 OTUD7BQ6GQQ9 843 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC57-204ENST00000392345 BOLA2Q9H3K6 86 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 SAP30BPQ9UHR5 308 aaKnown RBP16.94■□□□□ 0.3
CCDC57-204ENST00000392345 KCNH4Q9UQ05 1017 aa16.94■□□□□ 0.3
CCDC57-204ENST00000392345 CHGBP05060 677 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 PDE6AP16499 860 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 PLCG2P16885 1265 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 MAP3K12Q12852 859 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 TAF1CQ15572 869 aaPredicted RBP16.93■□□□□ 0.3
CCDC57-204ENST00000392345 DCTPP1Q9H773 170 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 DNAJC18Q9H819 358 aa16.93■□□□□ 0.3
CCDC57-204ENST00000392345 TBC1D12O60347 775 aa16.92■□□□□ 0.3
CCDC57-204ENST00000392345 PTPRAP18433 802 aa16.92■□□□□ 0.3
CCDC57-204ENST00000392345 ATP5JP18859 108 aa16.92■□□□□ 0.3
CCDC57-204ENST00000392345 SHROOM1Q2M3G4 852 aaPredicted RBP16.92■□□□□ 0.3
CCDC57-204ENST00000392345 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms