RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 USP49Q70CQ1 688 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 H2AFXP16104 143 aaPredicted RBP16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 MCAMP43121 646 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 HLFQ16534 295 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 JMYQ8N9B5 988 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 NR5A1Q13285 461 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 AXDND1Q5T1B0 1012 aaPredicted RBP16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
LRRFIP1-204ENST00000392000 C19orf44Q9H6X5 657 aa16.65■□□□□ 0.26
LRRFIP1-204ENST00000392000 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
LRRFIP1-204ENST00000392000 CMA1P23946 247 aa16.65■□□□□ 0.26
LRRFIP1-204ENST00000392000 PHKA1P46020 1223 aa16.65■□□□□ 0.26
LRRFIP1-204ENST00000392000 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
LRRFIP1-204ENST00000392000 TEX33O43247 280 aa16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 PRKAB2O43741 272 aa16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 YEATS4O95619 227 aa16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 AKAP17AQ02040 695 aaKnown RBP16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.263e-6■■■■□ 22.1
LRRFIP1-204ENST00000392000 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 PIH1D3Q9NQM4 214 aaKnown RBP16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 PARP3Q9Y6F1 533 aa16.64■□□□□ 0.26
LRRFIP1-204ENST00000392000 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 ZBTB43O43298 467 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 ITGA6P23229 1130 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 RAD51AP2Q09MP3 1159 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 L2HGDHQ9H9P8 463 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 PDE11AQ9HCR9 933 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 TADA3O75528 432 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 CAPN2P17655 700 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 SAFBQ15424 915 aaKnown RBP eCLIP16.64■□□□□ 0.251e-7■□□□□ 11
LRRFIP1-204ENST00000392000 ZSCAN26Q16670 478 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 POLR3EQ9NVU0 708 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 SLIT1O75093 1534 aa16.64■□□□□ 0.25
LRRFIP1-204ENST00000392000 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 SLC39A14Q15043 492 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 MB21D2Q8IYB1 491 aaPredicted RBP16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 APPBP2Q92624 585 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 ADGRL3Q9HAR2 1447 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 RAI14Q9P0K7 980 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 ZMYND10O75800 440 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 CYP2C19P33261 490 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 HSPA2P54652 639 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 CDC5LQ99459 802 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 SLC12A7Q9Y666 1083 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 CDC25AP30304 524 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 JAKMIP3Q5VZ66 844 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 RASSF8Q8NHQ8 419 aa16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 MRPL44Q9H9J2 332 aaKnown RBP16.63■□□□□ 0.25
LRRFIP1-204ENST00000392000 CC2D1AQ6P1N0 951 aaPredicted RBP16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 BRAPQ7Z569 592 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 VSTM4Q8IW00 320 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 CCP110O43303 1012 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 DIS3L2Q8IYB7 885 aaKnown RBP16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 CAPZA3Q96KX2 299 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 RSPH14Q9UHP6 348 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 NCAPD2Q15021 1401 aa16.62■□□□□ 0.25
LRRFIP1-204ENST00000392000 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 MRPS25P82663 173 aaKnown RBP16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 VPS16Q9H269 839 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 LCMT1Q9UIC8 334 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 JCADQ9P266 1359 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 TBC1D8O95759 1140 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 MAGEB6Q8N7X4 407 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 ACRBPQ8NEB7 543 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 TFR2Q9UP52 801 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 MARF1Q9Y4F3 1742 aaKnown RBP16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 LONRF2Q1L5Z9 754 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 BLZF1Q9H2G9 400 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 NEDD4P46934 1319 aa16.61■□□□□ 0.25
LRRFIP1-204ENST00000392000 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 EFCAB8A8MWE9 144 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 PRDM1O75626 825 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 ERCC3P19447 782 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 BMP6P22004 513 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 CHMP4BP1P59074 171 aa16.6■□□□□ 0.25
LRRFIP1-204ENST00000392000 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms