RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 PIWIL2Q8TC59 973 aaKnown RBP0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 UBASH3BQ8TF42 649 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 LARP4BQ92615 738 aaKnown RBP0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 RGMAQ96B86 450 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 RNF32Q9H0A6 362 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 RBSNQ9H1K0 784 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 EPB41L4AQ9HCS5 686 aaPredicted RBP0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 RAB6BQ9NRW1 208 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 C19orf73Q9NVV2 129 aa0.06□□□□□ -2.4
RNU6-258P-201ENST00000390884 DNAJC9-AS1A6NH13 148 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 LINC01387J3KSC0 135 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 FOXN1O15353 648 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 SMAD6O43541 496 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 SPRY2O43597 315 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 NOBOXO60393 691 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 IGKV2-30P06310 120 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 NFICP08651 508 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 SNHG28P0DPA3 235 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 FDX1P10109 184 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 RAB6AP20340 208 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 PLAURQ03405 335 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 PTGDRQ13258 359 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 RAPGEF1Q13905 1077 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 PRKD1Q15139 912 aaPredicted RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 PLEKHN1Q494U1 663 aaPredicted RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 CC2D2BQ6DHV5 1058 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 LAIR1Q6GTX8 287 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 LIPIQ6XZB0 460 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 FAM124AQ86V42 546 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 CIR1Q86X95 450 aaPredicted RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 ZNF483Q8TF39 744 aaPredicted RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 ZCCHC14Q8WYQ9 949 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 NELL1Q92832 810 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 DDX11Q96FC9 970 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 INTS4Q96HW7 963 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 NIFKQ9BYG3 293 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 CD248Q9HCU0 757 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 KCNK4Q9NYG8 393 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 MBD1Q9UIS9 605 aaPredicted RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 LRFN2Q9ULH4 789 aa0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 RTCBQ9Y3I0 505 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 ANKRD17O75179 2603 aaKnown RBP0.05□□□□□ -2.4
RNU6-258P-201ENST00000390884 OR14I1A6ND48 311 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 F12P00748 615 aaPredicted RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 GNRH1P01148 92 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 CAP1Q01518 475 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 COL10A1Q03692 680 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 USP39Q53GS9 565 aaKnown RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 ESCO1Q5FWF5 840 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 BORAQ6PGQ7 559 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 NPNTQ6UXI9 565 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 LRRC69Q6ZNQ3 347 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 RD3Q7Z3Z2 195 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 NUTM1Q86Y26 1132 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 PPARGC1BQ86YN6 1023 aaKnown RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 NPAS4Q8IUM7 802 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 SEPT12Q8IYM1 358 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 TMEFF1Q8IYR6 380 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 LGI4Q8N135 537 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 KRT78Q8N1N4 520 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 MZB1Q8WU39 189 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 EZH1Q92800 747 aaPredicted RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 SMARCC1Q92922 1105 aaPredicted RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 ZNF414Q96IQ9 312 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 CEP63Q96MT8 703 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 ALPK1Q96QP1 1244 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 CARD10Q9BWT7 1032 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 CWC22Q9HCG8 908 aaKnown RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 BRD7Q9NPI1 651 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 ZDHHC3Q9NYG2 299 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 SLAMF8Q9P0V8 285 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 REXO2Q9Y3B8 237 aaKnown RBP0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 SPATA31A6Q5VVP1 1343 aa0.04□□□□□ -2.4
RNU6-258P-201ENST00000390884 IGKV2D-30A0A075B6S6 120 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 DDX3YO15523 660 aaKnown RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 CXCR3P49682 368 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 HNRNPA3P51991 378 aaKnown RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 HK2P52789 917 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 PLCB3Q01970 1234 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 SOX4Q06945 474 aaPredicted RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 TUBA3CQ13748 450 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 R3HDM1Q15032 1099 aaKnown RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 SURF1Q15526 300 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 TUBA3EQ6PEY2 450 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 DZIP3Q86Y13 1208 aaKnown RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 PLD4Q96BZ4 506 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 C1QTNF7Q9BXJ2 289 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 RSAD1Q9HA92 442 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 SUSD2Q9UGT4 822 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 ICKQ9UPZ9 632 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 ZKSCAN5Q9Y2L8 839 aa0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 GTF3C5Q9Y5Q8 519 aaPredicted RBP0.03□□□□□ -2.4
RNU6-258P-201ENST00000390884 OTOGLQ3ZCN5 2332 aa0.03□□□□□ -2.41
RNU6-258P-201ENST00000390884 FBN3Q75N90 2809 aa0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 A0A1B0GTL3 188 aa0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 ANTXRLA6NF34 631 aa0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 PRSS44E7EML9 344 aa0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 PER1O15534 1290 aaPredicted RBP0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 GHRHP01286 108 aa0.02□□□□□ -2.41
RNU6-258P-201ENST00000390884 IL2RAP01589 272 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms