RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.27■□□□□ 0.36
IGHV3-48-201ENST00000390624 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
IGHV3-48-201ENST00000390624 DDX4Q9NQI0 724 aaKnown RBP17.27■□□□□ 0.36
IGHV3-48-201ENST00000390624 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.35
IGHV3-48-201ENST00000390624 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 PLCG2P16885 1265 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 TMED8Q6PL24 325 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 CASP8AP2Q9UKL3 1982 aa17.26■□□□□ 0.35
IGHV3-48-201ENST00000390624 DDTLA6NHG4 134 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 SH3BP5LQ7L8J4 393 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 TEX11Q8IYF3 940 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 SH3RF3Q8TEJ3 882 aaPredicted RBP17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 LAMB1P07942 1786 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
IGHV3-48-201ENST00000390624 TESPA1A2RU30 521 aaPredicted RBP17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 SLC34A2O95436 690 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 CYP7A1P22680 504 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 INPP5BP32019 993 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 MS4A4AQ96JQ5 239 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 CRBNQ96SW2 442 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 SNCAIPQ9Y6H5 919 aa17.24■□□□□ 0.35
IGHV3-48-201ENST00000390624 SMARCA5O60264 1052 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 ATP5JP18859 108 aa17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 GTF2A2P52657 109 aa17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 OSBPL5Q9H0X9 879 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-48-201ENST00000390624 DOCK2Q92608 1830 aa17.22■□□□□ 0.35
IGHV3-48-201ENST00000390624 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
IGHV3-48-201ENST00000390624 PPATQ06203 517 aa17.22■□□□□ 0.35
IGHV3-48-201ENST00000390624 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
IGHV3-48-201ENST00000390624 ATRNL1Q5VV63 1379 aa17.22■□□□□ 0.35
IGHV3-48-201ENST00000390624 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 GOLIM4O00461 696 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 TBC1D12O60347 775 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 PPIL2Q13356 520 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 NOM1Q5C9Z4 860 aaKnown RBP17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 TGFBRAP1Q8WUH2 860 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 PTPN18Q99952 460 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 DHX36Q9H2U1 1008 aaKnown RBP17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 BOLA2Q9H3K6 86 aa17.21■□□□□ 0.35
IGHV3-48-201ENST00000390624 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 IRF6O14896 467 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 DYNLL1P63167 89 aaKnown RBP17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 SNAPC2Q13487 334 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 AAMPQ13685 434 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 CCL15Q16663 113 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 SLC9C2Q5TAH2 1124 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 HAUS7Q99871 368 aa17.2■□□□□ 0.34
IGHV3-48-201ENST00000390624 GPR25O00155 361 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 CETPP11597 493 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 MIGA1Q8NAN2 632 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
IGHV3-48-201ENST00000390624 PDE6AP16499 860 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 ZNF296Q8WUU4 475 aaPredicted RBP17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 R3HDMLQ9H3Y0 253 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 FOCADQ5VW36 1801 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 FLT1P17948 1338 aa17.18■□□□□ 0.34
IGHV3-48-201ENST00000390624 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
IGHV3-48-201ENST00000390624 DGKZQ13574 1117 aa17.17■□□□□ 0.34
IGHV3-48-201ENST00000390624 FOXP4Q8IVH2 680 aaPredicted RBP17.17■□□□□ 0.34
IGHV3-48-201ENST00000390624 KCNH4Q9UQ05 1017 aa17.17■□□□□ 0.34
IGHV3-48-201ENST00000390624 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
IGHV3-48-201ENST00000390624 FKTNO75072 461 aa17.16■□□□□ 0.34
IGHV3-48-201ENST00000390624 PTPRAP18433 802 aa17.16■□□□□ 0.34
IGHV3-48-201ENST00000390624 USP5P45974 858 aa17.16■□□□□ 0.34
IGHV3-48-201ENST00000390624 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
IGHV3-48-201ENST00000390624 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms