RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 SNCAIPQ9Y6H5 919 aa13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
IGHV4-28-201ENST00000390612 PTPRFP10586 1907 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 MYH1P12882 1939 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 DDTLA6NHG4 134 aaPredicted RBP13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 NOM1Q5C9Z4 860 aaKnown RBP13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 TMED8Q6PL24 325 aaPredicted RBP13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 ADGRA1Q86SQ6 560 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 ZNF341Q9BYN7 854 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 ANTXR1Q9H6X2 564 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 ELP3Q9H9T3 547 aa13.92□□□□□ -0.18
IGHV4-28-201ENST00000390612 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 APBB1O00213 710 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 INPP5BP32019 993 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 ZKSCAN4Q969J2 545 aaPredicted RBP13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 OPTNQ96CV9 577 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 CSADQ9Y600 493 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 NDUFB9Q9Y6M9 179 aa13.91□□□□□ -0.18
IGHV4-28-201ENST00000390612 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 ERO1BQ86YB8 467 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 SH3RF3Q8TEJ3 882 aaPredicted RBP13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 PTPN18Q99952 460 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 DOCK1Q14185 1865 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 HTTP42858 3142 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 ATAD5Q96QE3 1844 aa13.9□□□□□ -0.18
IGHV4-28-201ENST00000390612 TBC1D12O60347 775 aa13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 ALDH1A1P00352 501 aa13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 ATP5JP18859 108 aa13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 OSBPL5Q9H0X9 879 aaPredicted RBP13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
IGHV4-28-201ENST00000390612 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 BAG3O95817 575 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 PLCG2P16885 1265 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 CYP7A1P22680 504 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 PPATQ06203 517 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 PPIL2Q13356 520 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 PICALMQ13492 652 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 BRI3BPQ8WY22 251 aa13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 AATFQ9NY61 560 aaKnown RBP eCLIP13.88□□□□□ -0.19
IGHV4-28-201ENST00000390612 IRF6O14896 467 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 IDH1O75874 414 aaKnown RBP13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 GTF2A2P52657 109 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 MAGEB6Q8N7X4 407 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 OTUD5Q96G74 571 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 HAUS7Q99871 368 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 KCNH4Q9UQ05 1017 aa13.87□□□□□ -0.19
IGHV4-28-201ENST00000390612 CENPFP49454 3210 aa13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 GPR25O00155 361 aa13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 DYNLL1P63167 89 aaKnown RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 CERS3Q8IU89 383 aa13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 ZSCAN29Q8IWY8 852 aaPredicted RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 EDC3Q96F86 508 aaKnown RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 RIOK1Q9BRS2 568 aaKnown RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 DDX60LQ5H9U9 1706 aaKnown RBP13.86□□□□□ -0.19
IGHV4-28-201ENST00000390612 GOLIM4O00461 696 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 CTNND1O60716 968 aaKnown RBP13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 PDE6AP16499 860 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 AAMPQ13685 434 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 MOGSQ13724 837 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 SCYL3Q8IZE3 742 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 ZNF296Q8WUU4 475 aaPredicted RBP13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 BOLA2Q9H3K6 86 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 FLT1P17948 1338 aa13.85□□□□□ -0.19
IGHV4-28-201ENST00000390612 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 CCL15-CCL14A0A0B4J2E2 113 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 CETPP11597 493 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 SNAPC2Q13487 334 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 RRP1BQ14684 758 aaKnown RBP13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 CCL15Q16663 113 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 SLC9C2Q5TAH2 1124 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 OTUD7BQ6GQQ9 843 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 PAG1Q9NWQ8 432 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
IGHV4-28-201ENST00000390612 HERC5Q9UII4 1024 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms