RNA–Protein interactions for RNA: ENST00000390372.3

TRBV5-5-201, Transcript of T cell receptor beta variable 5-5, humanhuman

APPRIS P1 BASIC

Gene TRBV5-5, Length 350 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5-201ENST00000390372 MIGA2Q7L4E1 593 aa13.32□□□□□ -0.28
TRBV5-5-201ENST00000390372 DNAJC2Q99543 621 aaKnown RBP13.32□□□□□ -0.28
TRBV5-5-201ENST00000390372 ELP3Q9H9T3 547 aa13.32□□□□□ -0.28
TRBV5-5-201ENST00000390372 RNF186Q9NXI6 227 aa13.32□□□□□ -0.28
TRBV5-5-201ENST00000390372 AATFQ9NY61 560 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRBV5-5-201ENST00000390372 GOLIM4O00461 696 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 TRPA1O75762 1119 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 MAGEB6Q8N7X4 407 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 SH3RF3Q8TEJ3 882 aaPredicted RBP13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 OPTNQ96CV9 577 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 PAG1Q9NWQ8 432 aa13.31□□□□□ -0.28
TRBV5-5-201ENST00000390372 MAST2Q6P0Q8 1798 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 GTF2A2P52657 109 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 SLC9C2Q5TAH2 1124 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 ZFPM1Q8IX07 1006 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 HAUS7Q99871 368 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 DDX4Q9NQI0 724 aaKnown RBP13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 ZNF112Q9UJU3 913 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 SUPT16HQ9Y5B9 1047 aaKnown RBP13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
TRBV5-5-201ENST00000390372 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 TNS4Q8IZW8 715 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 ZKSCAN4Q969J2 545 aaPredicted RBP13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 OTUD5Q96G74 571 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 OSBPL5Q9H0X9 879 aaPredicted RBP13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 TSKSQ9UJT2 592 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 ATRNL1Q5VV63 1379 aa13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
TRBV5-5-201ENST00000390372 DDTLA6NHG4 134 aaPredicted RBP13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 TBC1D12O60347 775 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 USP5P45974 858 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 MAP3K10Q02779 954 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 PPATQ06203 517 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 ADGRA1Q86SQ6 560 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 IFNL1Q8IU54 200 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 TGFBRAP1Q8WUH2 860 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 PICK1Q9NRD5 415 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 SNCAIPQ9Y6H5 919 aa13.28□□□□□ -0.28
TRBV5-5-201ENST00000390372 PCNTO95613 3336 aa13.27□□□□□ -0.28
TRBV5-5-201ENST00000390372 MAGEB6P1A0A0J9YX57 407 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 ERC2O15083 957 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 CETPP11597 493 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 PDE6AP16499 860 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 INPP5BP32019 993 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 PPIL2Q13356 520 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 MIGA1Q8NAN2 632 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 TTC41PQ6P2S7 1318 aa13.27□□□□□ -0.29
TRBV5-5-201ENST00000390372 TESPA1A2RU30 521 aaPredicted RBP13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 FLT1P17948 1338 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 GJA5P36382 358 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 DYNLL1P63167 89 aaKnown RBP13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 FOXP4Q8IVH2 680 aaPredicted RBP13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 MAPKAPK5Q8IW41 473 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 SCYL3Q8IZE3 742 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 CRACR2BQ8N4Y2 399 aaPredicted RBP13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 CFHR5Q9BXR6 569 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 ZNF532Q9HCE3 1301 aa13.26□□□□□ -0.29
TRBV5-5-201ENST00000390372 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 PHF20L1A8MW92 1017 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 CCL15Q16663 113 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
TRBV5-5-201ENST00000390372 OTOFQ9HC10 1997 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 IRF6O14896 467 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 GLRX3O76003 335 aaKnown RBP13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 ADD2P35612 726 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 UBE3CQ15386 1083 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 TTC6Q86TZ1 520 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 EDC3Q96F86 508 aaKnown RBP13.24□□□□□ -0.29
TRBV5-5-201ENST00000390372 DDRGK1Q96HY6 314 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms